Evidence map›Paper›PMID 37849469›Full record

ArticleJournal of nematology2023

Plant Parasitic Nematode Identification in Complex Samples with Deep Learning.

Sahil Agarwal, Zachary C Curran, Guohao Yu, Shova Mishra, Anil Baniya, Mesfin Bogale, Kody Hughes, Oscar Salichs, Alina Zare, Zhe Jiang and 1 more

Abstract read
In one paragraph

Article in Journal of nematology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Sahil AgarwalDepartment of Electrical & Computer Engineering, University of Florida, Gainesville, Florida, 32611.
Zachary C CurranDepartment of Computer & Information Science and Engineering, University of Florida, Gainesville, Florida 32611.
Guohao YuDepartment of Electrical & Computer Engineering, University of Florida, Gainesville, Florida, 32611.
Shova MishraDepartment of Entomology and Nematology, University of Florida, Gainesville, Florida 32611.
Anil BaniyaDepartment of Entomology and Nematology, University of Florida, Gainesville, Florida 32611.
Mesfin BogaleDepartment of Entomology and Nematology, University of Florida, Gainesville, Florida 32611.
Kody HughesDepartment of Entomology and Nematology, University of Florida, Gainesville, Florida 32611.
Oscar SalichsDepartment of Entomology and Nematology, University of Florida, Gainesville, Florida 32611.
Alina ZareDepartment of Electrical & Computer Engineering, University of Florida, Gainesville, Florida, 32611.
Zhe JiangDepartment of Computer & Information Science and Engineering, University of Florida, Gainesville, Florida 32611.
Peter DiGennaroDepartment of Entomology and Nematology, University of Florida, Gainesville, Florida 32611.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant parasitic nematodes are significant contributors to yield loss worldwide, causing devastating losses to every crop species, in every climate. Mitigating these losses requires swift and informed management strategies, centered on identification and quantification of field populations. Current plant parasitic nematode identification methods rely heavily on manual analyses of microscope images by a highly trained nematologist. This mode is not only expensive and time consuming, but often excludes the possibility of widely sharing and disseminating results to inform regional trends and potential emergent issues. This work presents a new public dataset containing annotated images of plant parasitic nematodes from heterologous soil extractions. This dataset serves to propagate new automated methodologies or speedier plant parasitic nematode identification using multiple deep learning object detection models and offers a path towards widely shared tools, results, and meta-analyses.

Indexed as

deep learningdetectiondiagnosisidentificationmethodtechnique

Identifiers

PMID37849469
PMCPMC10578830

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.