Evidence map›Paper›PMID 37847877›Full record

ArticleGenetics2023

Mechanisms of lineage specification in Caenorhabditis elegans.

Jun Liu, John Isaac Murray

Abstract read
In one paragraph

Article in Genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Almost 40 years of studying homeobox genes in C. elegans.Development (Cambridge, England) · 2024
    Article
  7. Article
  8. Review
  9. SEM-2/SoxC regulates multiple aspects ofbioRxiv : the preprint server for biology · 2024
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jun LiuDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA.
John Isaac MurrayDepartment of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.

Funding

Molecular Mechanisms Regulating and Interpreting BMP SignalingR35GM130351 · NIGMS · CORNELL UNIVERSITY · PI Jun Liu · 2019 to 2026
$4.3M
Comparing cell types across mutants and species at single cell resolutionR01HD105819 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI MURRAY, JOHN ISAAC · 2021 to 2025
$2.2M
Decoding lineage and fate specification in the C. elegans embryoR35GM127093 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI MURRAY, JOHN ISAAC · 2018 to 2022
$2.0M
NICHD NIH HHS R01 HD105819NIGMS NIH HHS R35 GM127093NIGMS NIH HHS R35 GM130351
6 · The paper itself

Abstract

The studies of cell fate and lineage specification are fundamental to our understanding of the development of multicellular organisms. Caenorhabditis elegans has been one of the premiere systems for studying cell fate specification mechanisms at single cell resolution, due to its transparent nature, the invariant cell lineage, and fixed number of somatic cells. We discuss the general themes and regulatory mechanisms that have emerged from these studies, with a focus on somatic lineages and cell fates. We next review the key factors and pathways that regulate the specification of discrete cells and lineages during embryogenesis and postembryonic development; we focus on transcription factors and include numerous lineage diagrams that depict the expression of key factors that specify embryonic founder cells and postembryonic blast cells, and the diverse somatic cell fates they generate. We end by discussing some future perspectives in cell and lineage specification.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsAnimalsCell DifferentiationCell LineageTranscription FactorsCaenorhabditis elegans ProteinsTranscription FactorsCaenorhabditis eleganscell fate specificationcell signaling pathwaysembryonic developmentlineage specificationpostembryonic developmenttranscription factorsWormBook

Identifiers

PMID37847877
PMCPMC11491538

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.