Evidence map›Paper›PMID 37845628›Full record

ArticleBMC plant biology2023

High-throughput method for Oxygen Consumption Rate measurement (OCR) in plant mitochondria.

Hanna Fuchs, Arleta Malecka, Adrianna Budzinska, Wieslawa Jarmuszkiewicz, Liliana Ciszewska, Aleksandra M Staszak, Joanna Kijowska-Oberc, Ewelina Ratajczak

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Redox dynamics in seeds ofFrontiers in plant science · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Hanna FuchsInstitute of Dendrology, Polish Academy of Sciences, Parkowa 5, Kornik, 62-035, Poland. hkijak@man.poznan.pl.
Arleta MaleckaDepartment of Epidemiology and Cancer Prevention, Greater Poland Cancer Centre, Garbary 15, Poznan, 61-866, Poland.
Adrianna BudzinskaDepartment of Bioenergetics, Faculty of Biology, Adam Mickiewicz University, Poznan, Uniwersytetu Poznanskiego 6, Poznan, 61-614, Poland.
Wieslawa JarmuszkiewiczDepartment of Bioenergetics, Faculty of Biology, Adam Mickiewicz University, Poznan, Uniwersytetu Poznanskiego 6, Poznan, 61-614, Poland.
Liliana CiszewskaInstitute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University in Poznan, Uniwersytetu Poznanskiego 6, Poznan, 61-614, Poland.
Aleksandra M StaszakLaboratory of Plant Physiology, Department of Plant Biology and Ecology Faculty of Biology, University of Bialystok, Ciolkowskiego 1J, Bialystok, 15-245, Poland.
Joanna Kijowska-ObercInstitute of Dendrology, Polish Academy of Sciences, Parkowa 5, Kornik, 62-035, Poland.
Ewelina RatajczakInstitute of Dendrology, Polish Academy of Sciences, Parkowa 5, Kornik, 62-035, Poland. eratajcz@man.poznan.pl.
Adam Mickiewicz University in Poznań · PLPolish Academy of Sciences · PLGreater Poland Cancer Center · PLInstitute of Dendrology · PLUniversity of Białystok · PL

Funding

Narodowe Centrum Nauki 2018/31/B/NZ9/01548
6 · The paper itself

Abstract

backgroundConventional methods to measure oxygen consumption, such as Clark-type electrodes, have limitations such as requiring a large amount of starting material. Moreover, commercially available kits for high-throughput methods are usually optimized for animal cells and mitochondria. Here, we present a novel method to measure the oxygen consumption rate using a high-throughput assay in isolated mitochondria of European beech seeds. To perform the measurements, we adapted the Agilent Seahorse XF Cell Mito Stress Test Kit protocol for measurements on plant mitochondria.

resultsThe optimized protocol for OCR measurement of mitochondria isolated from beech seeds allowed the observation of storage period-dependent gradual decreases in non-phosphorylating respiration, phosphorylating respiration and maximal FCCP-stimulated respiration. The longer the seeds were stored, the greater the impairment of respiratory function.

conclusionsThanks to this method it is possible to minimize the amount of plant material and conduct research to obtain information on the respiratory condition and activity of plant mitochondria, including the efficiency of oxidative phosphorylation and the maximum oxidative capacity of the respiratory chain. We demonstrated that the improved protocol is suitable for study of plant material.

Indexed as

Cell RespirationMitochondriaAnimalsElectron TransportOxidation-ReductionOxygenOxygen ConsumptionPlantsOxygenHigh-throughput plant mitochondria respiration assayOCROxygen consumption ratePlant mitochondria

Identifiers

PMID37845628
PMCPMC10580513
OpenAlexW4387663424

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.