Evidence map›Paper›PMID 37845226›Full record

ArticleNature communications2023

Distantly related Alteromonas bacteriophages share tail fibers exhibiting properties of transient chaperone caps.

Rafael Gonzalez-Serrano, Riccardo Rosselli, Juan J Roda-Garcia, Ana-Belen Martin-Cuadrado, Francisco Rodriguez-Valera, Matthew Dunne

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

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  5. Genomic analysis ofVirus evolution · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Rafael Gonzalez-SerranoEvolutionary Genomics Group, Universidad Miguel Hernández, San Juan de Alicante, Spain.ORCID http://orcid.org/0000-0002-7910-0682
Riccardo RosselliResearch & Development Department, LABAQUA S.A. Las Atalayas, Alicante, Spain.ORCID http://orcid.org/0000-0003-1393-0103
Juan J Roda-GarciaEvolutionary Genomics Group, Universidad Miguel Hernández, San Juan de Alicante, Spain.
Ana-Belen Martin-CuadradoDepartment of Physiology, Genetics and Microbiology, University of Alicante, Alicante, Spain.
Francisco Rodriguez-ValeraEvolutionary Genomics Group, Universidad Miguel Hernández, San Juan de Alicante, Spain.ORCID http://orcid.org/0000-0002-9809-2059
Matthew DunneInstitute of Food, Nutrition and Health, ETH Zurich, Switzerland. matthew.dunne@hest.ethz.ch.ORCID http://orcid.org/0000-0002-2329-8183
Universitat de Miguel Hernández d'Elx · ESUniversity of Alicante · ESETH Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The host recognition modules encoding the injection machinery and receptor binding proteins (RBPs) of bacteriophages are predisposed to mutation and recombination to maintain infectivity towards co-evolving bacterial hosts. In this study, we reveal how Alteromonas mediterranea schitovirus A5 shares its host recognition module, including tail fiber and cognate chaperone, with phages from distantly related families including Alteromonas myovirus V22. While the V22 chaperone is essential for producing active tail fibers, here we demonstrate production of functional A5 tail fibers regardless of chaperone co-expression. AlphaFold-generated models of tail fiber and chaperone pairs from phages A5, V22, and other Alteromonas phages reveal how amino acid insertions within both A5-like proteins results in a knob domain duplication in the tail fiber and a chaperone β-hairpin "tentacle" extension. These structural modifications are linked to differences in chaperone dependency between the A5 and V22 tail fibers. Structural similarity between the chaperones and intramolecular chaperone domains of other phage RBPs suggests an additional function of these chaperones as transient fiber "caps". Finally, our identification of homologous host recognition modules from morphologically distinct phages implies that horizontal gene transfer and recombination events between unrelated phages may be a more common process than previously thought among Caudoviricetes phages.

Indexed as

AlteromonasBacteriophagesCarrier ProteinsGenome, ViralHumansMolecular ChaperonesCarrier ProteinsMolecular Chaperones

Identifiers

PMID37845226
PMCPMC10579305
OpenAlexW4387692537

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.