Evidence map›Paper›PMID 37842061›Full record

ArticlePeerJ2023

Machine learning algorithms accurately identify free-living marine nematode species.

Simone Brito de Jesus, Danilo Vieira, Paula Gheller, Beatriz P Cunha, Fabiane Gallucci, Gustavo Fonseca

Abstract read
In one paragraph

Article in PeerJ, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Structured machine learning modeling to support conservation of deep-sea benthic biodiversity.Conservation biology : the journal of the Society for Conservation Biology · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Simone Brito de JesusMarine Science Institute, Federal University of São Paulo, Santos, São Paulo, Brazil.
Danilo VieiraMarine Science Institute, Federal University of São Paulo, Santos, São Paulo, Brazil.
Paula GhellerInstitute Oceanographic, University of São Paulo, São Paulo, Brazil.
Beatriz P CunhaDepartment of Animal Biology, State University of Campinas, Campinas, São Paulo, Brazil.
Fabiane GallucciMarine Science Institute, Federal University of São Paulo, Santos, São Paulo, Brazil.
Gustavo FonsecaMarine Science Institute, Federal University of São Paulo, Santos, São Paulo, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Identifying species, particularly small metazoans, remains a daunting challenge and the phylum Nematoda is no exception. Typically, nematode species are differentiated based on morphometry and the presence or absence of certain characters. However, recent advances in artificial intelligence, particularly machine learning (ML) algorithms, offer promising solutions for automating species identification, mostly in taxonomically complex groups. By training ML models with extensive datasets of accurately identified specimens, the models can learn to recognize patterns in nematodes' morphological and morphometric features. This enables them to make precise identifications of newly encountered individuals. Implementing ML algorithms can improve the speed and accuracy of species identification and allow researchers to efficiently process vast amounts of data. Furthermore, it empowers non-taxonomists to make reliable identifications. The objective of this study is to evaluate the performance of ML algorithms in identifying species of free-living marine nematodes, focusing on two well-known genera: Methods: A total of 40 species of Results: For both genera, the random forest (RF) algorithm demonstrated the highest accuracy in correctly classifying specimens into their respective species, achieving an accuracy rate of 93% for Conclusion: These results highlight the overall effectiveness of ML algorithms in species identification. Moreover, it demonstrates that the identification of marine nematodes can be automated, optimizing biodiversity and ecological studies, as well as turning species identification more accessible, efficient, and scalable. Ultimately it will contribute to our understanding and conservation of biodiversity.

Indexed as

Artificial IntelligenceNematodaAlgorithmsAnimalsChromadoreaHumansMachine LearningAcantholaimusIdentification-keyK-nearest neighborNematodaRandom ForestSabatieriaStochastic gradient boostingSupport vector machine

Identifiers

PMID37842061
PMCPMC10569207

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.