Evidence map›Paper›PMID 37835676›Full record

ArticleAnimals : an open access journal from MDPI2023

Multi-Trait Single-Step Genomic Prediction for Milk Yield and Milk Components for Polish Holstein Population.

Hasan Önder, Beata Sitskowska, Burcu Kurnaz, Dariusz Piwczyński, Magdalena Kolenda, Uğur Şen, Cem Tırınk, Demet Çanga Boğa

Abstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Hasan ÖnderDepartment of Animal Science, Ondokuz Mayis University, Samsun 55139, Türkiye.ORCID 0000-0002-8404-8700
Beata SitskowskaDepartment of Animal Biotechnology and Genetic, Faculty of Animal Breeding and Biology, Bydgoszcz University of Science and Technology, 85084 Bydgoszcz, Poland.ORCID 0000-0002-1036-7450
Burcu KurnazDepartment of Animal Science, Ondokuz Mayis University, Samsun 55139, Türkiye.
Dariusz PiwczyńskiDepartment of Animal Biotechnology and Genetic, Faculty of Animal Breeding and Biology, Bydgoszcz University of Science and Technology, 85084 Bydgoszcz, Poland.ORCID 0000-0001-8298-2316
Magdalena KolendaDepartment of Animal Biotechnology and Genetic, Faculty of Animal Breeding and Biology, Bydgoszcz University of Science and Technology, 85084 Bydgoszcz, Poland.ORCID 0000-0002-9260-4391
Uğur ŞenDepartment of Agricultural Biotechnology, Ondokuz Mayis University, Samsun 55139, Türkiye.ORCID 0000-0001-6058-1140
Cem TırınkDepartment of Animal Science, Iğdır University, Iğdır 76000, Türkiye.ORCID 0000-0001-6902-5837
Demet Çanga BoğaDepartment of Chemistry and Chemical Processing, Osmaniye Korkut Ata University, Osmaniye 80050, Türkiye.

Funding

Ondokuz Mayıs University PYO.ZRT.1901.22.001
6 · The paper itself

Abstract

The objective of our study was to evaluate the predictive ability of a multi-trait genomic prediction model that accounts for interactions between marker effects to estimate heritability and genetic correlations of traits including 305-day milk yield, milk fat percentage, milk protein percentage, milk lactose percentage, and milk dry matter percentage in the Polish Holstein Friesian cow population. For this aim, 14,742 SNP genotype records for 586 Polish Holstein Friesian dairy cows from Poland were used. Single-Trait-ssGBLUP (ST) and Multi-Trait-ssGBLUP (MT) methods were used for estimation. We examined 305-day milk yield (MY, kg), milk fat percentage (MF, %), milk protein percentage (MP, %), milk lactose percentage (ML, %), and milk dry matter percentage (MDM, %). The results showed that the highest marker effect rank correlation was found between milk fat percentage and milk dry matter. The weakest marker effect rank correlation was found between ML and all other traits. Obtained accuracies of this study were between 0.770 and 0.882, and 0.773 and 0.876 for MT and ST, respectively, which were acceptable values. All estimated bias values were positive, which is proof of underestimation. The highest heritability value was obtained for MP (0.3029) and the lowest heritability value was calculated for ML (0.2171). Estimated heritability values were low for milk yield and milk composition as expected. The strongest genetic correlation was estimated between MDM and MF (0.4990) and the weakest genetic correlation was estimated between MY and ML (0.001). The genetic relations with milk yield were negative and can be ignored as they were not significant. In conclusion, multi-trait genomic prediction can be more beneficial than single-trait genomic prediction.

Indexed as

GBLUPgenomic selectionmilk compositionmulti-trait predictionsingle-trait prediction

Identifiers

PMID37835676
PMCPMC10572056

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.