Evidence map›Paper›PMID 37834322›Full record

ArticleInternational journal of molecular sciences2023

Analytical Ultracentrifugation Detects Quaternary Rearrangements and Antibody-Induced Conformational Selection of the SARS-CoV-2 Spike Trimer.

Giuditta Guerrini, Dora Mehn, Francesco Fumagalli, Sabrina Gioria, Mattia Pedotti, Luca Simonelli, Filippo Bianchini, Davide F Robbiani, Luca Varani, Luigi Calzolai

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Giuditta GuerriniEuropean Commission, Joint Research Centre (JRC), 21027 Ispra, Italy.ORCID 0000-0002-1446-0556
Dora MehnEuropean Commission, Joint Research Centre (JRC), 21027 Ispra, Italy.ORCID 0000-0003-3482-2996
Francesco FumagalliEuropean Commission, Joint Research Centre (JRC), 21027 Ispra, Italy.
Sabrina GioriaEuropean Commission, Joint Research Centre (JRC), 21027 Ispra, Italy.ORCID 0000-0001-7150-9523
Mattia PedottiInstitute for Research in Biomedicine, Università della Svizzera Italiana, 6500 Bellinzona, Switzerland.
Luca SimonelliInstitute for Research in Biomedicine, Università della Svizzera Italiana, 6500 Bellinzona, Switzerland.
Filippo BianchiniInstitute for Research in Biomedicine, Università della Svizzera Italiana, 6500 Bellinzona, Switzerland.ORCID 0000-0002-0746-7629
Davide F RobbianiInstitute for Research in Biomedicine, Università della Svizzera Italiana, 6500 Bellinzona, Switzerland.ORCID 0000-0001-7379-3484
Luca VaraniInstitute for Research in Biomedicine, Università della Svizzera Italiana, 6500 Bellinzona, Switzerland.
Luigi CalzolaiEuropean Commission, Joint Research Centre (JRC), 21027 Ispra, Italy.ORCID 0000-0002-8474-7974

Funding

Swiss National Science Foundation 157699
6 · The paper itself

Abstract

Analytical ultracentrifugation (AUC) analysis shows that the SARS-CoV-2 trimeric Spike (S) protein adopts different quaternary conformations in solution. The relative abundance of the "open" and "close" conformations is temperature-dependent, and samples with different storage temperature history have different open/close distributions. Neutralizing antibodies (NAbs) targeting the S receptor binding domain (RBD) do not alter the conformer populations; by contrast, a NAb targeting a cryptic conformational epitope skews the Spike trimer toward an open conformation. The results highlight AUC, which is typically applied for molecular mass determination of biomolecules as a powerful tool for detecting functionally relevant quaternary protein conformations.

Indexed as

SARS-CoV-2Spike Glycoprotein, CoronavirusAntibodies, NeutralizingAntibodies, ViralEpitopesHumansProtein DomainsUltracentrifugationAntibodies, NeutralizingAntibodies, ViralEpitopesSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2analytical ultracentrifugationantibodyAUCconformationSARS-CoV-2sedimentationspiketrimer

Identifiers

PMID37834322
PMCPMC10573103

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.