Evidence map›Paper›PMID 37833851›Full record

ArticleThe journal of histochemistry and cytochemistry : official journal of the Histochemistry Society2023

Hyperspectral Raman Imaging for Automated Recognition of Human Renal Amyloid.

Jeong Hee Kim, Chi Zhang, C John Sperati, Ishan Barman, Serena M Bagnasco

Open access · greenAbstract read
In one paragraph

Article in The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.1field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Jeong Hee KimDepartment of Mechanical Engineering, Johns Hopkins University, Baltimore, Maryland, Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0001-5689-1445
Chi ZhangDepartment of Mechanical Engineering, Johns Hopkins University, Baltimore, Maryland, Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0002-1911-8258
C John SperatiDivision of Nephrology, Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0002-8409-0714
Ishan BarmanDepartment of Mechanical Engineering, Johns Hopkins University, Baltimore, Maryland, Johns Hopkins University School of Medicine, Baltimore, Maryland.
Serena M BagnascoClinical Renal Biopsy Service, Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0002-9092-3313
Johns Hopkins University · US

Funding

Wide-Field Short-Wave Infrared (SWIR) multiphoton (MP) tissue imagingP41EB015871 · NIBIB · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SO, PETER T. · 2012 to 2021
$11.3M
Spectroscopy assisted mechano-chemical phenotype recognition nanoscopeDP2GM128198 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI BARMAN, ISHAN · 2017 to 2017
$2.5M
NIBIB NIH HHS P41 EB015871NIGMS NIH HHS DP2 GM128198
6 · The paper itself

Abstract

In the clinical setting, routine identification of the main types of tissue amyloid deposits, light-chain amyloid (AL) and serum amyloid A (AA), is based on histochemical staining; rarer types of amyloid require mass spectrometry analysis. Raman spectroscopic imaging is an analytical tool, which can be used to chemically map, and thus characterize, the molecular composition of fluid and solid tissue. In this proof-of-concept study, we tested the feasibility of applying Raman spectroscopy combined with artificial intelligence to detect and characterize amyloid deposits in unstained frozen tissue sections from kidney biopsies with pathologic diagnosis of AL and AA amyloidosis and control biopsies with no amyloidosis (NA). Raman hyperspectral images, mapped in a 2D grid-like fashion over the tissue sections, were obtained. Three machine learning-assisted analysis models of the hyperspectral images could accurately distinguish AL (types λ and κ), AA, and NA 93-100% of the time. Although very preliminary, these findings illustrate the potential of Raman spectroscopy as a technique to identify, and possibly, subtype renal amyloidosis.

Indexed as

AmyloidosisPlaque, AmyloidAmyloidArtificial IntelligenceHumansKidneyAmyloidamyloidosiskidneyRAMANspectroscopy

Identifiers

PMID37833851
PMCPMC10617441
OpenAlexW4387637095

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.