Evidence map›Paper›PMID 37832963›Full record

ArticleBMJ open gastroenterology2023

Polygenic risk score predicts risk of primary sclerosing cholangitis in inflammatory bowel disease.

Ming-Hsi Wang, Jessica J Friton, Laura E Raffals, Jonathan A Leighton, Shabana F Pasha, Michael F Picco, Kelly Monroe, Billy D Nix, Rodney D Newberry, William A Faubion

Abstract read
In one paragraph

Article in BMJ open gastroenterology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Observational
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ming-Hsi WangMayo Clinic, Mankato, Minnesota, USA wang.ming-hsi@mayo.edu.ORCID 0000-0002-1188-8258
Jessica J FritonMayo Clinic, Rochester, Minnesota, USA.
Laura E RaffalsMayo Clinic, Rochester, Minnesota, USA.
Jonathan A LeightonMayo Clinic Scottsdale, Scottsdale, Arizona, USA.
Shabana F PashaMayo Clinic Scottsdale, Scottsdale, Arizona, USA.
Michael F PiccoMayo Clinic in Florida, Jacksonville, Florida, USA.
Kelly MonroeWashington University in St Louis, St Louis, Missouri, USA.
Billy D NixWashington University in St Louis, St Louis, Missouri, USA.
Rodney D Newberry *Washington University in St Louis, St Louis, Missouri, USA.
William A Faubion *Mayo Clinic, Rochester, Minnesota, USA.

Funding

Washington University DDRCC Supplemental Equipment RequestP30DK052574 · NIDDK · WASHINGTON UNIVERSITY · PI Nicholas O. Davidson · 2000 to 2026
$30.8M
NIDDK NIH HHS P30 DK052574
6 · The paper itself

Abstract

backgroundForty distinct primary sclerosing cholangitis (PSC) genomic loci have been identified through multiancestry meta-analyses. The polygenic risk score (PRS) could serve as a promising tool to discover unique disease behaviour, like PSC, underlying inflammatory bowel disease (IBD).

aimTo test whether PRS indicates PSC risk in patients with IBD. MATERIALS AND

methodsMayo Clinic and Washington University at St Louis IBD cohorts were used to test our hypothesis. PRS was modelled through the published PSC loci and weighted with their corresponding effect size. Logistic regression was applied to predict the PSC risk.

resultsIn total, 63 (5.6%) among 1130 patients with IBD of European ancestry had PSC. Among 381 ulcerative colitis (UC), 12% had PSC; in contrast to 1.4% in 761 Crohn disease (CD). Compared with IBD alone, IBD-PSC had significantly higher PRS (PSC risk: 3.0% at the lowest PRS quartile vs 7.2% at the highest PRS quartile, P

conclusionsWe found evidence that patients with IBD with PSC presented with a clinical course difference from that of patients with IBD alone. PRS can influence PSC risk in patients with IBD. Once validated in an independent cohort, this may help identify patients with the highest likelihood of developing PSC.

Indexed as

Cholangitis, SclerosingColitis, UlcerativeCrohn DiseaseInflammatory Bowel DiseasesHumansRisk Factorsgeneticsinflammatory bowel diseaseprimary sclerosing cholangitis

Identifiers

PMID37832963
PMCPMC10583098

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.