Evidence map›Paper›PMID 37828441›Full record

ArticleBMC plant biology2023

Comparative transcriptome analysis of high- and low-embryogenic Hevea brasiliensis genotypes reveals involvement of phytohormones in somatic embryogenesis.

Ling Li, Xiaolong Sun, Wencai Yu, Mingchun Gui, Yanfen Qiu, Min Tang, Hai Tian, Guoping Liang

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Ling LiThe Center of Rubber Research, Yunnan Institute of Tropical Crops, Xishuangbanna, China.
Xiaolong SunThe Center of Rubber Research, Yunnan Institute of Tropical Crops, Xishuangbanna, China.
Wencai YuThe Center of Rubber Research, Yunnan Institute of Tropical Crops, Xishuangbanna, China.
Mingchun GuiThe Center of Rubber Research, Yunnan Institute of Tropical Crops, Xishuangbanna, China.
Yanfen QiuThe Center of Rubber Research, Yunnan Institute of Tropical Crops, Xishuangbanna, China.
Min TangThe Center of Rubber Research, Yunnan Institute of Tropical Crops, Xishuangbanna, China.
Hai TianThe Center of Rubber Research, Yunnan Institute of Tropical Crops, Xishuangbanna, China.
Guoping LiangThe Center of Rubber Research, Yunnan Institute of Tropical Crops, Xishuangbanna, China. gpliang520@163.com.
Yunnan Institute of Tropical Crops · CN

Funding

Sci-Tech Innovation System Construction for Tropical Crops Grant of Yunnan Province RF2023-1YITC Science fund for Distinguished Young Scholars QNCZ2022-7
6 · The paper itself

Abstract

backgroundRubber plant (Hevea brasiliensis) is one of the major sources of latex. Somatic embryogenesis (SE) is a promising alterative to its propagation by grafting and seed. Phytohormones have been shown to influence SE in different plant species. However, limited knowledge is available on the role of phytohormones in SE in Hevea. The anther cultures of two Hevea genotypes (Yunyan 73477-YT and Reken 628-RT) with contrasting SE rate were established and four stages i.e., anthers (h), anther induced callus (y), callus differentiation state (f), and somatic embryos (p) were studied. UPLC-ESI-MS/MS and transcriptome analyses were used to study phytohormone accumulation and related expression changes in biosynthesis and signaling genes.

resultsYT showed higher callus induction rate than RT. Of the two genotypes, only YT exhibited successful SE. Auxins, cytokinins (CKs), abscisic acid (ABA), jasmonic acid (JA), salicylic acid (SA), gibberellins (GAs), and ethylene (ETH) were detected in the two genotypes. Indole-3-acetic acid (IAA), CKs, ABA, and ETH had notable differences in the studied stages of the two genotypes. The differentially expressed genes identified in treatment comparisons were majorly enriched in MAPK and phytohormone signaling, biosynthesis of secondary metabolites, and metabolic pathways. The expression changes in IAA, CK, ABA, and ETH biosynthesis and signaling genes confirmed the differential accumulation of respective phytohormones in the two genotypes.

conclusionThese results suggest potential roles of phytohormones in SE in Hevea.

Indexed as

HeveaPlant Growth RegulatorsAbscisic AcidCytokininsEmbryonic DevelopmentEthylenesGene Expression ProfilingGenotypeTandem Mass SpectrometryAbscisic AcidCytokininsethyleneEthylenesPlant Growth RegulatorsAbscisic acidAuxinsCytokininsEthyleneH2O2MAPK signalingSomatic embryogenesis

Identifiers

PMID37828441
PMCPMC10571474
OpenAlexW4387597987

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.