Evidence map›Paper›PMID 37828016›Full record

ArticleNature communications2023

Large-scale recording of neuronal activity in freely-moving mice at cellular resolution.

Aniruddha Das, Sarah Holden, Julie Borovicka, Jacob Icardi, Abigail O'Niel, Ariel Chaklai, Davina Patel, Rushik Patel, Stefanie Kaech Petrie, Jacob Raber and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Aniruddha DasDepartment of Neurosciences, Lerner Research Institute, Cleveland Clinic Foundation, Cleveland, OH, USA.ORCID http://orcid.org/0000-0002-1376-3619
Sarah HoldenDepartment of Behavioral Neuroscience, Oregon Health and Science University, Portland, OR, USA.
Julie BorovickaDepartment of Neurosciences, Lerner Research Institute, Cleveland Clinic Foundation, Cleveland, OH, USA.
Jacob IcardiDepartment of Neurosciences, Lerner Research Institute, Cleveland Clinic Foundation, Cleveland, OH, USA.
Abigail O'NielDepartment of Behavioral Neuroscience, Oregon Health and Science University, Portland, OR, USA.
Ariel ChaklaiDepartment of Behavioral Neuroscience, Oregon Health and Science University, Portland, OR, USA.
Davina PatelDepartment of Neurosciences, Lerner Research Institute, Cleveland Clinic Foundation, Cleveland, OH, USA.
Rushik PatelDepartment of Neurosciences, Lerner Research Institute, Cleveland Clinic Foundation, Cleveland, OH, USA.
Stefanie Kaech PetrieJungers Center, Oregon Health and Science University, Portland, OR, USA.
Jacob RaberDepartment of Behavioral Neuroscience, Oregon Health and Science University, Portland, OR, USA.ORCID http://orcid.org/0000-0002-9861-9893
Hod DanaDepartment of Neurosciences, Lerner Research Institute, Cleveland Clinic Foundation, Cleveland, OH, USA. danah@ccf.org.ORCID http://orcid.org/0000-0002-8093-2363
Cleveland Clinic · USOregon Health & Science University · USCleveland Clinic Lerner College of Medicine · USOregon National Primate Research Center · US

Funding

Optimization of CaMPARI for large-scale, cellular-resolution activity recording in freely-moving miceU01NS123658 · NINDS · CLEVELAND CLINIC LERNER COM-CWRU · PI CAMPBELL, ROBERT E., DANA, HOD MICHAEL · 2021 to 2025
$2.6M
Neuronal activity modulation and age-related neurodegenerationR21AG065914 · NIA · CLEVELAND CLINIC LERNER COM-CWRU · PI DANA, HOD MICHAEL, RABER, JACOB · 2020 to 2020
$695k
Role of human apolipoprotein E isoforms in long-term effects of West Nile Virus exposure on Alzheimer's disease-related behavioral alteration, cognitive injury, neuroinflammation, and neuropathologyR21AG079158 · NIA · OREGON HEALTH & SCIENCE UNIVERSITY · PI HIRSCH, ALEC J, RABER, JACOB · 2023 to 2024
$424k
NIA NIH HHS R21 AG065914NINDS NIH HHS U01 NS123658
6 · The paper itself

Abstract

Current methods for recording large-scale neuronal activity from behaving mice at single-cell resolution require either fixing the mouse head under a microscope or attachment of a recording device to the animal's skull. Both of these options significantly affect the animal behavior and hence also the recorded brain activity patterns. Here, we introduce a different method to acquire snapshots of single-cell cortical activity maps from freely-moving mice using a calcium sensor called CaMPARI. CaMPARI has a unique property of irreversibly changing its color from green to red inside active neurons when illuminated with 400 nm light. We capitalize on this property to demonstrate cortex-wide activity recording without any head fixation, tethering, or attachment of a miniaturized device to the mouse's head. Multiple cortical regions were recorded while the mouse was performing a battery of behavioral and cognitive tests. We identified task-dependent activity patterns across motor and somatosensory cortices, with significant differences across sub-regions of the motor cortex and correlations across several activity patterns and task parameters. This CaMPARI-based recording method expands the capabilities of recording neuronal activity from freely-moving and behaving mice under minimally-restrictive experimental conditions and provides large-scale volumetric data that are currently not accessible otherwise.

Indexed as

MicroscopyNeuronsAnimalsBehavior, AnimalHeadMiceSkull

Identifiers

PMID37828016
PMCPMC10570384
OpenAlexW4387579493

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.