Evidence map›Paper›PMID 37821996›Full record

ArticleEuropean journal of medical research2023

FANCD2 as a novel prognostic biomarker correlated with immune and drug therapy in Hepatitis B-related hepatocellular carcinoma.

Xiaowei Tang, Bei Luo, Shu Huang, Jiao Jiang, Yuan Chen, Wensen Ren, Xiaomin Shi, Wei Zhang, Lei Shi, Xiaolin Zhong and 1 more

Open access · goldAbstract read
In one paragraph

Article in European journal of medical research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Xiaowei Tang *Department of Gastroenterology, the Affiliated Hospital of Southwest Medical University, Luzhou, China.
Bei Luo *Department of Gastroenterology, the Affiliated Hospital of Southwest Medical University, Luzhou, China.
Shu Huang *Department of Gastroenterology, the People's Hospital of Lianshui, Huaian, China.
Jiao JiangDepartment of Gastroenterology, the Affiliated Hospital of Southwest Medical University, Luzhou, China.
Yuan ChenDepartment of Gastroenterology, the Affiliated Hospital of Southwest Medical University, Luzhou, China.
Wensen RenDepartment of Gastroenterology, the Affiliated Hospital of Southwest Medical University, Luzhou, China.
Xiaomin ShiDepartment of Gastroenterology, the Affiliated Hospital of Southwest Medical University, Luzhou, China.
Wei ZhangDepartment of Gastroenterology, the Affiliated Hospital of Southwest Medical University, Luzhou, China.
Lei ShiDepartment of Gastroenterology, the Affiliated Hospital of Southwest Medical University, Luzhou, China.
Xiaolin ZhongDepartment of Gastroenterology, the Affiliated Hospital of Southwest Medical University, Luzhou, China.
Muhan LüDepartment of Gastroenterology, the Affiliated Hospital of Southwest Medical University, Luzhou, China. lvmuhan@swmu.edu.cn.
Affiliated Hospital of Southwest Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFerroptosis is related to the immunosuppression of tumors and plays a critical role in cancer progression. Fanconi anemia complementation group D2 (FANCD2) is a vital gene that regulates ferroptosis. However, the mechanism of action of FANCD2 in Hepatitis B-related hepatocellular carcinoma (HCC) remains unknown. In this study, we investigated the prognostic significance and mechanism of action of FANCD2 in Hepatitis B-related HCC.

methodsThe expression of FANCD2 in Hepatitis B-related HCC was explored using The Cancer Genome Atlas (TCGA) and validated using the Gene Expression Omnibus (GEO) database. Univariate and multivariate Cox regression analyses and Kaplan-Meier survival curves were used to analyze the relationship between FANCD2 expression and the overall survival of patients with Hepatitis B-related HCC. Protein-protein interaction networks for FANCD2 were built using the STRING website. In addition, correlations between FANCD2 expression and the dryness index, tumor mutational burden, microsatellite instability (MSI), immune pathways, genes involved in iron metabolism, and sorafenib chemotherapeutic response were analyzed.

resultsOur results indicated that FANCD2 was significantly overexpressed in Hepatitis B-related HCC and demonstrated a strong predictive ability for diagnosis (Area Under Curve, 0.903) and prognosis of the disease. High FANCD2 expression was associated with poor prognosis, high-grade tumors, high expression of PDL-1, high MSI scores, and low sorafenib IC50 in Hepatitis B-related HCC. BRCA1, BRCA2, FAN1, and FANCC were vital proteins interacting with FANCD2. The expression level of FANCD2 significantly correlated with the infiltration levels of Treg cells, B cells, CD8 + T cells, CD4 + T cells, neutrophils, macrophages, myeloid dendritic cells, and NK cells in Hepatitis B-related HCC. FANCD2 was positively correlated with the tumor proliferation signature pathway, DNA repair, and cellular response to hypoxia.

conclusionOur study indicated that FANCD2 was a potential novel biomarker and immunotherapeutic target against Hepatitis B-related HCC, which might be related to the chemotherapeutic response to sorafenib.

Indexed as

Carcinoma, HepatocellularFanconi AnemiaLiver NeoplasmsFanconi Anemia Complementation Group D2 ProteinHumansPrognosisSorafenibFANCD2 protein, humanFanconi Anemia Complementation Group D2 ProteinSorafenibBiomarkerFANCD2Hepatocellular carcinomaImmunityPrognostic

Identifiers

PMID37821996
PMCPMC10566141
OpenAlexW4387535655

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.