Evidence map›Paper›PMID 37821448›Full record

ArticleNature communications2023

Structure of full-length cobalamin-dependent methionine synthase and cofactor loading captured in crystallo.

Johnny Mendoza, Meredith Purchal, Kazuhiro Yamada, Markos Koutmos

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Laboratory evolution ofJournal of bacteriology · 2025
    Article
  7. Review
  8. Laboratory evolution ofbioRxiv : the preprint server for biology · 2024
    Article
  9. Emerging Roles of Vitamin BInternational journal of molecular sciences · 2024
    Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Johnny Mendoza *Department of Chemistry, University of Michigan, Ann Arbor, MI, 48109, USA.ORCID 0000-0003-1573-4202
Meredith Purchal *Program in Chemical Biology, University of Michigan, Ann Arbor, MI, 48109, USA.
Kazuhiro YamadaDepartment of Chemistry, University of Michigan, Ann Arbor, MI, 48109, USA. yamadak@umich.edu.
Markos KoutmosDepartment of Chemistry, University of Michigan, Ann Arbor, MI, 48109, USA. mkoutmos@umich.edu.ORCID 0000-0003-0933-6312
University of Michigan · USNew England Biolabs (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cobalamin-dependent methionine synthase (MS) is a key enzyme in methionine and folate one-carbon metabolism. MS is a large multi-domain protein capable of binding and activating three substrates: homocysteine, folate, and S-adenosylmethionine for methylation. Achieving three chemically distinct methylations necessitates significant domain rearrangements to facilitate substrate access to the cobalamin cofactor at the right time. The distinct conformations required for each reaction have eluded structural characterization as its inherently dynamic nature renders structural studies difficult. Here, we use a thermophilic MS homolog (tMS) as a functional MS model. Its exceptional stability enabled characterization of MS in the absence of cobalamin, marking the only studies of a cobalamin-binding protein in its apoenzyme state. More importantly, we report the high-resolution full-length MS structure, ending a multi-decade quest. We also capture cobalamin loading in crystallo, providing structural insights into holoenzyme formation. Our work paves the way for unraveling how MS orchestrates large-scale domain rearrangements crucial for achieving challenging chemistries.

Indexed as

5-Methyltetrahydrofolate-Homocysteine S-MethyltransferaseMethionineFolic AcidS-AdenosylmethionineVitamin B 125-Methyltetrahydrofolate-Homocysteine S-MethyltransferaseFolic AcidMethionineS-AdenosylmethionineVitamin B 12

Identifiers

PMID37821448
PMCPMC10567725
OpenAlexW4387539958

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.