Evidence map›Paper›PMID 37821439›Full record

ArticleCell death & disease2023

USP39 promotes hepatocellular carcinogenesis through regulating alternative splicing in cooperation with SRSF6/HNRNPC.

Jingyi Zheng, Shasha Wu, Mao Tang, Shaoyan Xi, Yanchen Wang, Jun Ren, Hao Luo, Pengchao Hu, Liangzhan Sun, Yuyang Du and 6 more

Open access · goldAbstract read
In one paragraph

Article in Cell death & disease, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Oncogenic role of LncRNA DLEU2 in thyroid cancer through a NAT10/USP39 regulatory axis.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
    Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Jingyi Zheng *Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Shasha Wu *Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Mao TangDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Shaoyan XiDepartment of Pathology, Sun Yat-Sen University Cancer Center, Guangzhou, China.
Yanchen WangDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Jun RenDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Hao LuoDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Pengchao HuDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Liangzhan SunDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Yuyang DuDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Hui YangDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Fenfen WangDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Han GaoDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Ziwei DaiDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Xijun OuDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.ORCID 0000-0002-4525-5205
Yan LiDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China. liy33@sustech.edu.cn.ORCID 0000-0003-1146-5578
Southern University of Science and Technology · CNSun Yat-sen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Abnormal alternative splicing (AS) caused by alterations in spliceosomal factors is implicated in cancers. Standard models posit that splice site selection is mainly determined by early spliceosomal U1 and U2 snRNPs. Whether and how other mid/late-acting spliceosome components such as USP39 modulate tumorigenic splice site choice remains largely elusive. We observed that hepatocyte-specific overexpression of USP39 promoted hepatocarcinogenesis and potently regulated splice site selection in transgenic mice. In human liver cancer cells, USP39 promoted tumor proliferation in a spliceosome-dependent manner. USP39 depletion deregulated hundreds of AS events, including the oncogenic splice-switching of KANK2. Mechanistically, we developed a novel RBP-motif enrichment analysis and found that USP39 modulated exon inclusion/exclusion by interacting with SRSF6/HNRNPC in both humans and mice. Our data represented a paradigm for the control of splice site selection by mid/late-acting spliceosome proteins and their interacting RBPs. USP39 and possibly other mid/late-acting spliceosome proteins may represent potential prognostic biomarkers and targets for cancer therapy.

Indexed as

Carcinoma, HepatocellularLiver NeoplasmsAlternative SplicingAnimalsCarcinogenesisHeterogeneous-Nuclear Ribonucleoprotein Group CHumansMicePhosphoproteinsRNA SplicingSerine-Arginine Splicing FactorsUbiquitin-Specific ProteasesHeterogeneous-Nuclear Ribonucleoprotein Group CHNRNPC protein, humanPhosphoproteinsSerine-Arginine Splicing FactorsSRSF6 protein, humanSRSF6 protein, mouseUbiquitin-Specific ProteasesUSP39 protein, human

Identifiers

PMID37821439
PMCPMC10567755
OpenAlexW4387541188

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.