Evidence map›Paper›PMID 37819979›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Measuring response functions of active materials from data.

Mehdi Molaei, Steven A Redford, Wen-Hung Chou, Danielle Scheff, Juan J de Pablo, Patrick W Oakes, Margaret L Gardel

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Enzyme Catalytic Parameters and Evolution Across the Dissipation Plane.International journal of molecular sciences · 2026
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Mehdi Molaei *Pritzker School of Molecular Engineering, University of Chicago, Chicago, IL 60637.
Steven A Redford *James Franck Institute, University of Chicago, Chicago, IL 60637.ORCID 0000-0003-1149-9401
Wen-Hung ChouJames Franck Institute, University of Chicago, Chicago, IL 60637.ORCID 0000-0003-1941-3393
Danielle ScheffJames Franck Institute, University of Chicago, Chicago, IL 60637.ORCID 0000-0001-5571-0382
Juan J de PabloPritzker School of Molecular Engineering, University of Chicago, Chicago, IL 60637.
Patrick W OakesDepartment of Cell and Molecular Physiology, Stritch School of Medicine, Loyola University Chicago, Maywood, IL 60153.ORCID 0000-0001-9951-1318
Margaret L GardelPritzker School of Molecular Engineering, University of Chicago, Chicago, IL 60637.ORCID 0000-0003-1846-9854

Funding

Graduate Program in Biophysical Sciences at the University of Chicago - Renewal 0T32EB009412 · NIBIB · UNIVERSITY OF CHICAGO · PI ENGEL, GREGORY S, SOSNICK, TOBIN R · 2009 to 2023
$4.9M
Mechanical Regulation of Cell Adhesion by Dynamic Cytoskeletal Assemblies - Resubmission 01R01GM104032 · NIGMS · UNIVERSITY OF CHICAGO · PI GARDEL, MARGARET LISE · 2015 to 2023
$2.5M
NIBIB NIH HHS T32 EB009412NIGMS NIH HHS R01 GM104032
6 · The paper itself

Abstract

From flocks of birds to biomolecular assemblies, systems in which many individual components independently consume energy to perform mechanical work exhibit a wide array of striking behaviors. Methods to quantify the dynamics of these so-called active systems generally aim to extract important length or time scales from experimental fields. Because such methods focus on extracting scalar values, they do not wring maximal information from experimental data. We introduce a method to overcome these limitations. We extend the framework of correlation functions by taking into account the internal headings of displacement fields. The functions we construct represent the material response to specific types of active perturbation within the system. Utilizing these response functions we query the material response of disparate active systems composed of actin filaments and myosin motors, from model fluids to living cells. We show we can extract critical length scales from the turbulent flows of an active nematic, anticipate contractility in an active gel, distinguish viscous from viscoelastic dissipation, and even differentiate modes of contractility in living cells. These examples underscore the vast utility of this method which measures response functions from experimental observations of complex active systems.

Indexed as

Actin CytoskeletonMyosinsActomyosinActomyosinMyosinsactive matteractive nematicactomyosin contractilitycomplex systems

Identifiers

PMID37819979
PMCPMC10589671

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.