Evidence map›Paper›PMID 37819513›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2024

Engineering Green-light-responsive Heterologous Gene Expression in Pseudomonas.

Angeles Hueso-Gil, Belén Calles, Víctor de Lorenzo

Abstract read
PubMed Publisher
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.0field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. ACS synthetic biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Angeles Hueso-GilSystems Biology Department, Centro Nacional de Biotecnología (CNB-CSIC), Madrid, Spain.
Belén CallesSystems Biology Department, Centro Nacional de Biotecnología (CNB-CSIC), Madrid, Spain.
Víctor de LorenzoSystems Biology Department, Centro Nacional de Biotecnología (CNB-CSIC), Madrid, Spain. vdlorenzo@cnb.csic.es.
Centro Nacional de Biotecnología · ESCentre for Plant Biotechnology and Genomics · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Engineering bacterial properties requires precision and fine-tuning for optimal control of the desired application. In consequence, it is essential to accurately turn the function of interest from OFF to ON state and vice versa, avoiding any type of residual activation. For this type of purpose, light switches have revealed a clean and powerful tool in which control does not depend on the addition of chemical compounds that may remain in the media. To reach this degree of directed regulation through light, the switch based on the cyanobacterial two-component system CcaSR system was previously adapted to manipulate Pseudomonas putida for transcription of a gene of interest. In this chapter, we describe how to induce biofilm formation by placing the expression of the c-di-GMP-producing diguanylate cyclase PleD from Caulobacter sp. under the control of the CcaSR system. The regulation through optogenetics accomplished with this protocol promotes higher exploitation of biofilm beneficial features in a cheaper and cleaner way compared to chemical induction.

Indexed as

Escherichia coli ProteinsPseudomonasBacterial ProteinsBiofilmsCyclic GMPGene ExpressionGene Expression Regulation, BacterialLightBacterial ProteinsCyclic GMPEscherichia coli ProteinsBiocatalysisBiofilmCcaSR systemOptogeneticsPseudomonas

Identifiers

PMID37819513
OpenAlexW4387519620

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.