Evidence map›Paper›PMID 37819423›Full record

ArticleThe protein journal2023

Improvement of α-amino Ester Hydrolase Stability via Computational Protein Design.

Colton E Lagerman, Emily A Joe, Martha A Grover, Ronald W Rousseau, Andreas S Bommarius

Abstract read
PubMed Publisher
In one paragraph

Article in The protein journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Optimizing Stability in Dynamic Small-Molecule Binding Proteins.Journal of the American Chemical Society · 2026
    Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Colton E LagermanChemical & Biomolecular Engineering, Georgia Institute of Technology, Atlanta, 30332, Georgia.
Emily A JoeChemical & Biomolecular Engineering, Georgia Institute of Technology, Atlanta, 30332, Georgia.
Martha A GroverChemical & Biomolecular Engineering, Georgia Institute of Technology, Atlanta, 30332, Georgia.
Ronald W RousseauChemical & Biomolecular Engineering, Georgia Institute of Technology, Atlanta, 30332, Georgia.
Andreas S BommariusChemical & Biomolecular Engineering, Georgia Institute of Technology, Atlanta, 30332, Georgia. andreas.bommarius@chbe.gatech.edu.
Georgia Institute of Technology · US

Funding

U.S. Food and Drug Administration U01FD006484U.S National Science Foundation, Graduate Research Fellowship Program (GRFP) DGE-1650044
6 · The paper itself

Abstract

Amino ester hydrolases (AEHs) are capable of rapid synthesis of cephalexin but suffer from rapid deactivation even at low temperatures. Previous efforts to engineer AEH have generated several improved variants but have been limited in scope in part due to limitations in activity assay throughput for β-lactam synthesis reactions. Rational design of 'whole variants' was explored to rapidly improve AEH thermostability by mutating between 3-15% of residues. Most variants were found to be inactive due to a mutated calcium binding site, the function of which has not previously been described. Four active variants, all with improved melting temperatures, were characterized in terms of synthesis and hydrolysis activity, melting temperature, and deactivation at 25°C. Two variants were found to have improved total turnover numbers relative to the initial AEH variant; however, a clear tradeoff exists between improved stability and overall activity of each variant.

Indexed as

beta-LactamsCarboxylic Ester HydrolasesBinding SitesEnzyme StabilityHydrolysisTemperaturebeta-LactamsCarboxylic Ester HydrolasesAmino ester hydrolaseComputational designProtein stabilityβ-lactam antibiotics

Identifiers

PMID37819423
OpenAlexW4387539843

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.