Evidence map›Paper›PMID 37819009›Full record

ArticleMedical physics2024

XRayWizard: Reconstructing 3-D lung surfaces from a single 2-D chest x-ray image via Vision Transformer.

Zhiyi Shi, Kaiwen Geng, Xiaoyan Zhao, Farhad Mahmoudi, Christopher J Haas, Joseph K Leader, Emrah Duman, Jiantao Pu

Abstract read
In one paragraph

Article in Medical physics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Zhiyi ShiDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Kaiwen GengDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Xiaoyan ZhaoDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Farhad MahmoudiDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Christopher J HaasDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Joseph K LeaderDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Emrah DumanDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Jiantao PuDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.

Funding

VECTOR CORE FACILITYP30CA047904 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Jessie Nedrow · 1988 to 2026
$158.0M
Clinical Validation Center for Lung Cancer Early DetectionU01CA271888 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI HANASH, SAMIR M · 2022 to 2025
$4.9M
Macro-vasculature: A Novel Image Biomarker of Lung CancerR01CA237277 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PU, JIANTAO · 2020 to 2024
$2.8M
Development and Validation of a Multimodal Ultrasound- Based Biomarker for Myofascial PainR61AT012282 · NCCIH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KIM, KANG, PU, JIANTAO · 2022 to 2022
$2.2M
NCCIH NIH HHS R61 AT012282NCI NIH HHS P30 CA047904NCI NIH HHS R01 CA237277NCI NIH HHS U01 CA271888the National Institutes of Health (NIH) P30CA047904the National Institutes of Health (NIH) R01CA237277the National Institutes of Health (NIH) R61AT012282the National Institutes of Health (NIH) U01CA271888UPMC Hillman Developmental Pilot Program
6 · The paper itself

Abstract

backgroundChest x-ray is widely utilized for the evaluation of pulmonary conditions due to its technical simplicity, cost-effectiveness, and portability. However, as a two-dimensional (2-D) imaging modality, chest x-ray images depict limited anatomical details and are challenging to interpret. PURPOSE: To validate the feasibility of reconstructing three-dimensional (3-D) lungs from a single 2-D chest x-ray image via Vision Transformer (ViT).

methodsWe created a cohort of 2525 paired chest x-ray images (scout images) and computed tomography (CT) acquired on different subjects and we randomly partitioned them as follows: (1) 1800 - training set, (2) 200 - validation set, and (3) 525 - testing set. The 3-D lung volumes segmented from the chest CT scans were used as the ground truth for supervised learning. We developed a novel model termed XRayWizard that employed ViT blocks to encode the 2-D chest x-ray image. The aim is to capture global information and establish long-range relationships, thereby improving the performance of 3-D reconstruction. Additionally, a pooling layer at the end of each transformer block was introduced to extract feature information. To produce smoother and more realistic 3-D models, a set of patch discriminators was incorporated. We also devised a novel method to incorporate subject demographics as an auxiliary input to further improve the accuracy of 3-D lung reconstruction. Dice coefficient and mean volume error were used as performance metrics as the agreement between the computerized results and the ground truth.

resultsIn the absence of subject demographics, the mean Dice coefficient for the generated 3-D lung volumes achieved a value of 0.738 ± 0.091. When subject demographics were included as an auxiliary input, the mean Dice coefficient significantly improved to 0.769 ± 0.089 (p < 0.001), and the volume prediction error was reduced from 23.5 ± 2.7%. to 15.7 ± 2.9%.

conclusionOur experiment demonstrated the feasibility of reconstructing 3-D lung volumes from 2-D chest x-ray images, and the inclusion of subject demographics as additional inputs can significantly improve the accuracy of 3-D lung volume reconstruction.

Indexed as

LungThoraxHumansImage Processing, Computer-AssistedTomography, X-Ray ComputedX-Rays2‐D chest x‐ray3‐D reconstructiondeep learninglung reconstructionvision transformer

Identifiers

PMID37819009
PMCPMC12923332

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.