Evidence map›Paper›PMID 37815256›Full record

ArticleMedical physics2024

A repository of grade 1 and 2 meningioma MRIs in a public dataset for radiomics reproducibility tests.

April Vassantachart, Yufeng Cao, Zhilei Shen, Karen Cheng, Michael Gribble, Jason C Ye, Gabriel Zada, Kyle Hurth, Anna Mathew, Samuel Guzman and 1 more

Abstract read
In one paragraph

Article in Medical physics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

April VassantachartDepartment of Radiation Oncology, LAC+USC Medical Center, Los Angeles, California, USA.
Yufeng CaoDepartment of Radiation Oncology, Keck School of Medicine, University of Southern California, Los Angeles, California, USA.
Zhilei ShenDepartment of Radiation Oncology, Keck School of Medicine, University of Southern California, Los Angeles, California, USA.
Karen ChengDepartment of Radiation Oncology, LAC+USC Medical Center, Los Angeles, California, USA.
Michael GribbleKeck School of Medicine, University of Southern California, Los Angeles, California, USA.
Jason C YeDepartment of Radiation Oncology, Keck School of Medicine, University of Southern California, Los Angeles, California, USA.
Gabriel ZadaDepartment of Neurological Surgery, Keck School of Medicine, University of Southern California, Los Angeles, California, USA.
Kyle HurthDepartment of Pathology, Keck School of Medicine, University of Southern California, Los Angeles, California, USA.
Anna MathewDepartment of Pathology, Keck School of Medicine, University of Southern California, Los Angeles, California, USA.
Samuel GuzmanDepartment of Pathology, Keck School of Medicine, University of Southern California, Los Angeles, California, USA.
Wensha YangDepartment of Radiation Oncology, Keck School of Medicine, University of Southern California, Los Angeles, California, USA.

Funding

Advanced prediction of GBM recurrence (TIME) for personalized radiotherapyR21CA267139 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI YANG, WENSHA · 2022 to 2024
$411k
NCI NIH HHS R21 CA267139
6 · The paper itself

Abstract

purposeMeningiomas are the most common primary brain tumors in adults with management varying widely based on World Health Organization (WHO) grade. However, there are limited datasets available for researchers to develop and validate radiomic models. The purpose of our manuscript is to report on the first dataset of meningiomas in The Cancer Imaging Archive (TCIA). ACQUISITION AND VALIDATION

methodsThe dataset consists of pre-operative MRIs from 96 patients with meningiomas who underwent resection from 2010-2019 and include axial T1post and T2-FLAIR sequences-55 grade 1 and 41 grade 2. Meningioma grade was confirmed based on the 2016 WHO Bluebook classification guideline by two neuropathologists and one neuropathology fellow. The hyperintense T1post tumor and hyperintense T2-FLAIR regions were manually contoured on both sequences and resampled to an isotropic resolution of 1 × 1 × 1 mm DATA FORMAT AND USAGE NOTES: The data was imported into TCIA for storage and can be accessed at https://doi.org/10.7937/0TKV-1A36. The total size of the dataset is 8.8GB, with 47 519 individual Digital Imaging and Communications in Medicine (DICOM) files consisting of 384 image series, and 192 structures. POTENTIAL APPLICATIONS: Grade 1 and 2 meningiomas have different treatment paradigms and are often treated based on radiologic diagnosis alone. Therefore, predicting grade prior to treatment is essential in clinical decision-making. This dataset will allow researchers to create models to auto-differentiate grade 1 and 2 meningiomas as well as evaluate for other pathologic features including mitotic index, brain invasion, and atypical features. Limitations of this study are the small sample size and inclusion of only two MRI sequences. However, there are no meningioma datasets on TCIA and limited datasets elsewhere although meningiomas are the most common intracranial tumor in adults.

Indexed as

Meningeal NeoplasmsMeningiomaAdultHumansMagnetic Resonance ImagingRadiomicsReproducibility of ResultsRetrospective StudiesatypicaldatasetmeningiomaradiomicsTCIA

Identifiers

PMID37815256
PMCPMC10939960

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.