Evidence map›Paper›PMID 37814155›Full record

ArticleNeuromolecular medicine2023

Genetic Variations and Altered Blood mRNA Level of Circadian Genes and BDNF as Risk Factors of Post-Stroke Cognitive Impairment Among Eastern Indians.

Dipanwita Sadhukhan, Arindam Biswas, Smriti Mishra, Koustav Chatterjee, Daytee Maji, Parama Mitra, Priyanka Mukherjee, Gargi Podder, Biman Kanti Ray, Atanu Biswas and 3 more

Abstract read
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Article in Neuromolecular medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. LncRNA-miRNA‒mRNA Network in Schizophrenia.Journal of molecular neuroscience : MN · 2025
    Article
  4. Machine learning-based predictive model for post-stroke dementia.BMC medical informatics and decision making · 2024
    Article
  5. Article
  6. Article
4 · The record

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5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Dipanwita SadhukhanDepartment of Biochemistry, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, West Bengal, 700019, India. Dipanwita.Sadhukhan@gmail.com.
Arindam BiswasMolecular Biology & Clinical Neuroscience Division, National Neurosciences Centre Calcutta, Kolkata, India.
Smriti MishraMolecular Biology & Clinical Neuroscience Division, National Neurosciences Centre Calcutta, Kolkata, India.
Koustav ChatterjeeDepartment of Neurology, Institute of Neurosciences Kolkata, Kolkata, India.
Daytee MajiDepartment of Biochemistry, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, West Bengal, 700019, India.
Parama MitraMolecular Biology & Clinical Neuroscience Division, National Neurosciences Centre Calcutta, Kolkata, India.
Priyanka MukherjeeMolecular Biology & Clinical Neuroscience Division, National Neurosciences Centre Calcutta, Kolkata, India.
Gargi PodderInstitute of Post Graduate of Medical Education & Research and Bangur Institute of Neurosciences, Kolkata, India.
Biman Kanti RayInstitute of Post Graduate of Medical Education & Research and Bangur Institute of Neurosciences, Kolkata, India.
Atanu BiswasInstitute of Post Graduate of Medical Education & Research and Bangur Institute of Neurosciences, Kolkata, India.
Tapas Kumar BanerjeeMolecular Biology & Clinical Neuroscience Division, National Neurosciences Centre Calcutta, Kolkata, India.
Subhra Prakash HuiS. N. Pradhan Centre for Neurosciences, University of Calcutta, Kolkata, India.
Ishani DebDepartment of Biochemistry, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, West Bengal, 700019, India. id3674@gmail.com.
National Neurosciences Centre · INBangur Institute of Neurosciences · INUniversity of Calcutta · INInstitute of Neurosciences Kolkata · IN

Funding

Department of Science & Technology, Govt. of India, under Cognitive Science Research Initiative Programme DST/CSRI-P/2017/22Department of Science & Technology, Govt. of India, under Cognitive Science Research Initiative Programme DST/CSRI-PDF/2021/12 & DST/CSRI/PDF-21/2018
6 · The paper itself

Abstract

Post-stroke cognitive impairment (PSCI) is a clinical outcome in around 30% of post-stroke survivors. BDNF is a major gene in this regard. It is regulated by circadian rhythm. The circadian genes are correlated with stroke timings at molecular level. However, studies suggesting the role of these on susceptibility to PSCI are limited. We aim here to determine: (a) genetic risk variants in circadian clock genes, BDNF and (b) dysregulation in expression level of CLOCK, BMAL1, and BDNF that may be associated with PSCI. BDNF (rs6265G/A, rs56164415C/T), CLOCK (rs1801260T/C, rs4580704G/C), and CRY2 (rs2292912C/G) genes variants were genotyped among 119 post-stroke survivors and 292 controls from Eastern part of India. In addition, we analyzed their gene expression in Peripheral blood Mononuclear cells (PBMC) from 15 PSCI cases and 12 controls. The mRNA data for BDNF was further validated by its plasma level through ELISA (n = 38). Among the studied variants, only rs4580704/CLOCK showed an overall association with PSCI (P = 0.001) and lower Bengali Mini-Mental State Examination (BMSE) score. Its 'C' allele showed a correlation with attention deficiency. The language and memory impairments showed association with rs6265/BDNF, while the 'CC' genotype of rs2292912/CRY2 negatively influenced language and executive function. A significant decrease in gene expression for CLOCK and BDNF in PBMC (influenced by specific genotypes) of PSCI patients was observed than controls. Unlike Pro-BDNF, plasma-level mBDNF was also lower in them. Our results suggest the genetic variants in CLOCK, CRY2, and BDNF as risk factors for PSCI among eastern Indians. At the same time, a lowering expression of CLOCK and BDNF genes in PSCI patients than controls describes their transcriptional dysregulation as underlying mechanism for post-stroke cognitive decline.

Indexed as

Cognitive DysfunctionStrokeBrain-Derived Neurotrophic FactorGenetic VariationHumansLeukocytes, MononuclearRisk FactorsBrain-Derived Neurotrophic FactorBDNFCircadian-clockPolymorphismPost-stroke cognitive impairmentRisk factors

Identifiers

PMID37814155
OpenAlexW4387449010

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.