Evidence map›Paper›PMID 37814034›Full record

ArticleMolecular biology reports2023

Development and characterization of microsatellite loci in Ulex parviflorus Pourr. And its cross-transferability to other Genisteae.

David Gutiérrez-Larruscain, Santiago Donat, Juli G Pausas, José Gabriel Segarra-Moragues

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Article in Molecular biology reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

4 authors.

David Gutiérrez-LarruscainCentro de Investigaciones sobre Desertificación (CIDE-CSIC), Ctra. Náquera Km. 4.5, Moncada, E-46113, Valencia, Spain. david.gutierrez-larruscain@ext.uv.es.ORCID http://orcid.org/0000-0003-2758-8441
Santiago DonatCentro de Investigaciones sobre Desertificación (CIDE-CSIC), Ctra. Náquera Km. 4.5, Moncada, E-46113, Valencia, Spain.
Juli G PausasCentro de Investigaciones sobre Desertificación (CIDE-CSIC), Ctra. Náquera Km. 4.5, Moncada, E-46113, Valencia, Spain.ORCID http://orcid.org/0000-0003-3533-5786
José Gabriel Segarra-MoraguesDepartamento de Botánica y Geología, Facultad de Ciencias Biológicas, Universitat de València, Avda. Dr. Moliner 50, Burjassot, E-46100, Valencia, Spain.ORCID http://orcid.org/0000-0003-0061-8647

Funding

Conselleria de Innovación, Universidades, Ciencia y Sociedad Digital, Generalitat Valenciana Prometeo/2021/040; 2021-2024Sixth Framework Programme FP7-ENV-2009-1-243888
6 · The paper itself

Abstract

backgroundThe genus Ulex is composed by 15 species distributed in Europe and Africa, but the majority of them are restricted to the Iberian Peninsula and Northwest Africa. Some of these species are common elements at the landscape level, and others contribute to global biodiversity as narrow endemics. Assayed nuclear and plastid Sanger-sequenced regions do not provide enough resolution to perform evolutionary studies on the genus, neither at the intraspecific population level nor at the interspecific phylogenetic level. Thus, we have developed and characterized a set of nuclear microsatellite loci in U. parviflorus to provide new highly polymorphic molecular markers for the genus Ulex. METHODS AND

resultsGenomic DNA enriched in microsatellite motifs using streptavidin-coated M-280 magnetic beads attached to 5'-biotinylated oligonucleotides was sequenced in a 454GS Junior System. After primer design, fluorescent-dyed amplicons were analyzed through capillary sequencing (ABI3730XL). Here we present twelve new high polimorphic SSRs markers developed in U. parviflorus specimens and tested in 120 individuals. The 12 SSR loci amplified a total of 152 alleles, and detected expected heterozygosities that ranged from 0.674 to 0.725 in the genotyped populations. Successful cross-species transferability of the 12 SSR loci to the rest of species included in the genus Ulex and three other representative Genisteae was achieved.

conclusionsThe 12 novel proposed SSRs loci will contribute to perform evolutionary studies and genetic research on the genus Ulex and in other Genisteae.

Indexed as

FabaceaeUlexGenotypeHumansMicrosatellite RepeatsPhylogenyGenisteaeMicrosatellitesSSRsUlex

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