Evidence map›Paper›PMID 37810771›Full record

ArticlePeerJ2023

Diversity and structure of the root-associated bacterial microbiomes of four mangrove tree species, revealed by high-throughput sequencing.

Jinlei Sui, Xiaowen He, Guohui Yi, Limin Zhou, Shunqing Liu, Qianqian Chen, Xiaohu Xiao, Jinyan Wu

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Endophytic Fungal Diversity of Mangrove FernsPlants (Basel, Switzerland) · 2024
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jinlei Sui *Public Research Center, Hainan Medical College, Haikou, China.
Xiaowen He *Public Research Center, Hainan Medical College, Haikou, China.
Guohui YiPublic Research Center, Hainan Medical College, Haikou, China.
Limin ZhouPublic Research Center, Hainan Medical College, Haikou, China.
Shunqing LiuPublic Research Center, Hainan Medical College, Haikou, China.
Qianqian ChenPublic Research Center, Hainan Medical College, Haikou, China.
Xiaohu XiaoRubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
Jinyan WuPublic Research Center, Hainan Medical College, Haikou, China.
Hainan Medical College Hospital · CNRubber Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Root-associated microbes of the mangrove trees play important roles in protecting and maintaining mangrove ecosystems. At present, most of our understanding of mangrove root-related microbial diversity is obtained from specific mangrove species in selected geographic regions. Relatively little is known about the composition of the bacterial microbiota existing in disparate mangrove species microenvironments, particularly the relationship among different mangrove species in tropical environments. Methods: We collected the root, rhizosphere soil, and non-rhizosphere soil of four mangrove trees ( Results: We analyzed the bacterial diversity and composition related to the diverse ecological niches of mangrove species. Our data confirmed distinct distribution patterns of bacterial communities in the three rhizocompartments of the four mangrove species. Microbiome composition varied with compartments and host mangrove species. The bacterial communities between the endosphere and the other two compartments were distinctly diverse independent of mangrove species. The large degree of overlap in critical community members of the same rhizocompartment across distinct mangrove species was found at the phylum level. Furthermore, this is the first report of

Indexed as

MicrobiotaTreesBacteriaHigh-Throughput Nucleotide SequencingPlant RootsRNA, Ribosomal, 16SSoilSoil MicrobiologyRNA, Ribosomal, 16SSoilAmplicon sequencingMangrove speciesMicrobial diversityMicrobiomeRoot-associated compartments

Identifiers

PMID37810771
PMCPMC10559887
OpenAlexW4387336573

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.