Evidence map›Paper›PMID 37810757›Full record

ArticleFrontiers in radiology2023

Selecting the best optimizers for deep learning-based medical image segmentation.

Aliasghar Mortazi, Vedat Cicek, Elif Keles, Ulas Bagci

Open access · goldAbstract read
In one paragraph

Article in Frontiers in radiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Aliasghar MortaziDepartment of Computer Vision and Image Analytic, Volastra Therapeutics, New York, NY, United States.
Vedat CicekDepartment of Cardiology, Health Sciences University, Istanbul, Turkey.
Elif KelesMachine & Hybrid Intelligence Lab, Department of Radiology, Northwestern University, Chicago, IL, United States.
Ulas BagciMachine & Hybrid Intelligence Lab, Department of Radiology, Northwestern University, Chicago, IL, United States.
Intel (United States) · USAcorda Therapeutics (United States) · USSağlık Bilimleri Üniversitesi · TR

Funding

Data Coordinating Center for the Type 1 Diabetes in Acute Pancreatitis ConsortiumU01DK127384 · NIDDK · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI Vernon M Chinchilli, Temel Tirkes · 2020 to 2026
$21.3M
Cyst-X: Interpretable Deep Learning Based Risk Stratification of Pancreatic Cystic TumorsR01CA246704 · NCI · UNIVERSITY OF CENTRAL FLORIDA · PI BAGCI, ULAS · 2020 to 2024
$2.4M
Radiologist-Centered Artificial Intelligence (RCAI) for Lung Cancer Screening and DiagnosisR01CA240639 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI BAGCI, ULAS · 2020 to 2024
$2.0M
Compact registration-free robotic tool guide for image guided percutaneous interventionsR15EB030356 · NIBIB · UNIVERSITY OF CENTRAL FLORIDA · PI SONG, SANGEUN · 2020 to 2020
$447k
Application of machine learning for fast prediction of MRI-induced RF heating in patients with implanted conductive leadsR03EB032943 · NIBIB · NORTHWESTERN UNIVERSITY AT CHICAGO · PI BAGCI, ULAS, GOLESTANI RAD, LALEH · 2022 to 2023
$141k
NCI NIH HHS R01 CA240639NCI NIH HHS R01 CA246704NIBIB NIH HHS R03 EB032943NIBIB NIH HHS R15 EB030356NIDDK NIH HHS U01 DK127384
6 · The paper itself

Abstract

Purpose: The goal of this work is to explore the best optimizers for deep learning in the context of medical image segmentation and to provide guidance on how to design segmentation networks with effective optimization strategies. Approach: Most successful deep learning networks are trained using two types of stochastic gradient descent (SGD) algorithms: adaptive learning and accelerated schemes. Adaptive learning helps with fast convergence by starting with a larger learning rate (LR) and gradually decreasing it. Momentum optimizers are particularly effective at quickly optimizing neural networks within the accelerated schemes category. By revealing the potential interplay between these two types of algorithms [LR and momentum optimizers or momentum rate (MR) in short], in this article, we explore the two variants of SGD algorithms in a single setting. We suggest using cyclic learning as the base optimizer and integrating optimal values of learning rate and momentum rate. The new optimization function proposed in this work is based on the Nesterov accelerated gradient optimizer, which is more efficient computationally and has better generalization capabilities compared to other adaptive optimizers. Results: We investigated the relationship of LR and MR under an important problem of medical image segmentation of cardiac structures from MRI and CT scans. We conducted experiments using the cardiac imaging dataset from the ACDC challenge of MICCAI 2017, and four different architectures were shown to be successful for cardiac image segmentation problems. Our comprehensive evaluations demonstrated that the proposed optimizer achieved better results (over a 2% improvement in the dice metric) than other optimizers in the deep learning literature with similar or lower computational cost in both single and multi-object segmentation settings. Conclusions: We hypothesized that the combination of accelerated and adaptive optimization methods can have a drastic effect in medical image segmentation performances. To this end, we proposed a new cyclic optimization method (

Indexed as

accelerated optimizationadaptive optimizationcyclic learningdeep learning optimizationsegmentation

Identifiers

PMID37810757
PMCPMC10551178
OpenAlexW4386988794

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.