Evidence map›Paper›PMID 37807051›Full record

ArticleBMC biology2023

Distinct hybridization modes in wide- and narrow-ranged lineages of Causonis (Vitaceae).

Jinren Yu, Hong Zhao, Yanting Niu, Yichen You, Russell L Barrett, Rindra Manasoa Ranaivoson, Romer Narindra Rabarijaona, Gaurav Parmar, Langxing Yuan, Xiaofeng Jin and 5 more

Abstract read
In one paragraph

Article in BMC biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Jinren YuState Key Laboratory of Plant Diversity and Specialty Crops, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China.
Hong ZhaoSchool of Life Science, Shanxi Normal University, Taiyuan, 030031, China.
Yanting NiuChina National Botanical Garden, Beijing, 100093, China.
Yichen YouState Key Laboratory of Plant Diversity and Specialty Crops, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China.
Russell L BarrettNational Herbarium of New South Wales, Australian Botanic Garden, Locked Bag 6002, Mount Annan, NSW, 2567, Australia.
Rindra Manasoa RanaivosonState Key Laboratory of Plant Diversity and Specialty Crops, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China.
Romer Narindra RabarijaonaState Key Laboratory of Plant Diversity and Specialty Crops, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China.
Gaurav ParmarNational Botanical Garden, Godawari, 44709, Nepal.
Langxing YuanTropical Crops Genetic Resources Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, 571101, China.
Xiaofeng JinZhejiang Provincial Key Laboratory of Forest Aromatic Plants-Based Healthcare Functions/School of Forestry and Bio-Technology, Zhejiang A&F University, Hangzhou, 311300, China.
Pan LiLaboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou, 310058, China.
Jianhua LiBiology Department, Hope College, Holland, MI, 49423, USA.
Jun WenDepartment of Botany, National Museum of Natural History, MRC166, Smithsonian Institution, Washington, DC, 20013-7012, USA.
Zhiduan ChenState Key Laboratory of Plant Diversity and Specialty Crops, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China.
Limin LuState Key Laboratory of Plant Diversity and Specialty Crops, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China. liminlu@ibcas.ac.cn.ORCID http://orcid.org/0000-0001-6973-7877

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundExplaining contrasting patterns of distribution between related species is crucial for understanding the dynamics of biodiversity. Despite instances where hybridization and whole genome duplication (WGD) can yield detrimental outcomes, a role in facilitating the expansion of distribution range has been proposed. The Vitaceae genus Causonis exhibits great variations in species' distribution ranges, with most species in the derived lineages having a much wider range than those in the early-diverged lineages. Hybridization and WGD events have been suggested to occur in Causonis based on evidence of phylogenetic discordance. The genus, therefore, provides us with an opportunity to for explore different hybridization and polyploidization modes in lineages with contrasting species' distribution ranges. However, the evolutionary history of Causonis incorporating potential hybridization and WGD events remains to be explored.

resultsWith plastid and nuclear data from dense sampling, this study resolved the phylogenetic relationships within Causonis and revealed significant cyto-nuclear discordance. Nuclear gene tree conflicts were detected across the genus, especially in the japonica-corniculata clade, which were mainly attributed to gene flow. This study also inferred the allopolyploid origin of the core Causonis species, which promoted the accumulation of stress-related genes. Causonis was estimated to have originated in continental Asia in the early Eocene, and experienced glaciation in the early Oligocene, shortly after the divergence of the early-divergent lineages. The japonica-corniculata clade mainly diversified in the Miocene, followed by temperature declines that may have facilitated secondary contact. Species distribution modeling based on current climate change predicted that the widespread C. japonica tends to be more invasive, while the endemic C. ciliifera may be at risk of extinction.

conclusionsThis study presents Causonis, a genus with complex reticulate evolutionary history, as a model of how hybridization and WGD modes differ in lineages of contrasting species' geographic ranges. It is important to consider specific evolutionary histories and genetic properties of the focal species within conservation strategies.

Indexed as

VitaceaeBiological EvolutionHybridization, GeneticPhylogenyAllopolyploidizationCausonisDistribution rangeHybridizationReticulate evolutionWhole genome duplication

Identifiers

PMID37807051
PMCPMC10561429

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.