Evidence map›Paper›PMID 37804485›Full record

ArticleAnnals of botany2024

Macroalgal microbiome biogeography is shaped by environmental drivers rather than geographical distance.

William S Pearman, Grant A Duffy, Xiaoyue P Liu, Neil J Gemmell, Sergio E Morales, Ceridwen I Fraser

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Article in Annals of botany, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

William S PearmanDepartment of Marine Science, University of Otago, New Zealand.ORCID 0000-0002-7265-8499
Grant A DuffyDepartment of Marine Science, University of Otago, New Zealand.ORCID 0000-0002-9031-8164
Xiaoyue P LiuDepartment of Marine Science, University of Otago, New Zealand.
Neil J GemmellDepartment of Anatomy, School of Biomedical Sciences, University of Otago, New Zealand.
Sergio E MoralesDepartment of Microbiology & Immunology, School of Biomedical Sciences, University of Otago, New Zealand.
Ceridwen I FraserDepartment of Marine Science, University of Otago, New Zealand.

Funding

Royal Society Te Apārangi MFP-20-UOO-173Rutherford Discovery fellowship RDF-UOO1803
6 · The paper itself

Abstract

BACKGROUND AND

aimsContrasting patterns of host and microbiome biogeography can provide insight into the drivers of microbial community assembly. Distance-decay relationships are a classic biogeographical pattern shaped by interactions between selective and non-selective processes. Joint biogeography of microbiomes and their hosts is of increasing interest owing to the potential for microbiome-facilitated adaptation.

methodsIn this study, we examine the coupled biogeography of the model macroalga Durvillaea and its microbiome using a combination of genotyping by sequencing (host) and 16S rRNA amplicon sequencing (microbiome). Alongside these approaches, we use environmental data to characterize the relationship between the microbiome, the host, and the environment. KEY

resultsWe show that although the host and microbiome exhibit shared biogeographical structure, these arise from different processes, with host biogeography showing classic signs of geographical distance decay, but with the microbiome showing environmental distance decay. Examination of microbial subcommunities, defined by abundance, revealed that the abundance of microbes is linked to environmental selection. As microbes become less common, the dominant ecological processes shift away from selective processes and towards neutral processes. Contrary to expectations, we found that ecological drift does not promote structuring of the microbiome.

conclusionsOur results suggest that although host macroalgae exhibit a relatively 'typical' biogeographical pattern of declining similarity with increasing geographical distance, the microbiome is more variable and is shaped primarily by environmental conditions. Our findings suggest that the Baas Becking hypothesis of 'everything is everywhere, the environment selects' might be a useful hypothesis to understand the biogeography of macroalgal microbiomes. As environmental conditions change in response to anthropogenic influences, the processes structuring the microbiome of macroalgae might shift, whereas those governing the host biogeography are less likely to change. As a result, increasingly decoupled host-microbe biogeography might be observed in response to such human influences.

Indexed as

MicrobiotaGeographyHumansRNA, Ribosomal, 16SRNA, Ribosomal, 16Sbiogeographydistance decayDurvillaeaholobiontmacroalgaemicrobiome

Identifiers

PMID37804485
PMCPMC10921836

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.