Evidence map›Paper›PMID 37804371›Full record

ArticleIndian journal of pediatrics2024

Next-Generation Sequencing in Unexplained Intellectual Disability.

Sapna Sandal, Ishwar Chander Verma, Sunita Bijarnia Mahay, Sudhisha Dubey, R K Sabharwal, Samarth Kulshrestha, Renu Saxena, Praveen Suman, Praveen Kumar, Ratna Dua Puri

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Article in Indian journal of pediatrics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
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2citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Sapna SandalInstitute of Medical Genetics and Genomics, Sir Ganga Ram Hospital, New Delhi, India.
Ishwar Chander VermaInstitute of Medical Genetics and Genomics, Sir Ganga Ram Hospital, New Delhi, India.
Sunita Bijarnia MahayInstitute of Medical Genetics and Genomics, Sir Ganga Ram Hospital, New Delhi, India.
Sudhisha DubeyInstitute of Medical Genetics and Genomics, Sir Ganga Ram Hospital, New Delhi, India.
R K SabharwalDepartment of Pediatric Neurology, Sir Ganga Ram Hospital, New Delhi, India.
Samarth KulshresthaInstitute of Medical Genetics and Genomics, Sir Ganga Ram Hospital, New Delhi, India.
Renu SaxenaInstitute of Medical Genetics and Genomics, Sir Ganga Ram Hospital, New Delhi, India.
Praveen SumanDepartment of Developmental Pediatrics, Sir Ganga Ram Hospital, New Delhi, India.
Praveen KumarDepartment of Pediatric Neurology, Sir Ganga Ram Hospital, New Delhi, India.
Ratna Dua PuriInstitute of Medical Genetics and Genomics, Sir Ganga Ram Hospital, New Delhi, India. ratnadpuri@yahoo.com.ORCID 0000-0003-2694-6147

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesTo determine the diagnostic yield of next generation sequencing (NGS) in patients with moderate/severe/profound intellectual disability (ID) unexplained by conventional tests and to assess the impact of definitive diagnosis on the clinical management and genetic counselling of these families.

methodsThis was a ambi-directional study conducted at Institute of Medical Genetics and Genomics, Sir Ganga Ram Hospital, New Delhi. The study comprised 227 patients (prospective cohort - 126, retrospective cohort - 101) in whom NGS based tests were performed.

resultsThe mean age of study cohort was 4.5 ± 4.4 y (2.5 mo to 37.3 y). The male: female ratio was 1.6:1. The overall diagnostic yield of NGS was 53.3% (121/227) with causative variants identified in 84 known ID genes. Autosomal recessive intellectual disability (ARID) (23.3%, 53/227) was the most common followed by autosomal dominant intellectual disability (ADID) (20.7%, 47/227) and X-linked intellectual disability (XLID) (9.2%, 21/227). The diagnostic yield was notably higher for ID plus associated condition group (55.6% vs. 20%) (p = 0.0075, Fisher's exact test) compared to isolated ID group. The impact of diagnosis on active or long-term management was observed in 17/121 (14%) and on reproductive outcomes in 26/121 (21.4%) families.

conclusionsThere is paucity of data on molecular genetic spectrum of ID from India. The current study identifies extensive genetic heterogeneity and the impact of NGS in patients with ID unexplained by standard genetic tests. The study identified ARID as the most common cause of ID with additional implications for reproductive outcomes. It reiterates the importance of phenotype in genetic testing.

Indexed as

High-Throughput Nucleotide SequencingIntellectual DisabilityAdolescentAdultChildChild, PreschoolFemaleGenetic CounselingGenetic TestingHumansIndiaInfantMaleProspective StudiesRetrospective StudiesYoung AdultAutosomal recessive intellectual disabilityDevelopmental delayIntellectual disabilityNext generation sequencing

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.