Evidence map›Paper›PMID 37802027›Full record

ArticleMolecular cell2023

Universal features of Nsp1-mediated translational shutdown by coronaviruses.

Katharina Schubert, Evangelos D Karousis, Ivo Ban, Christopher P Lapointe, Marc Leibundgut, Emilie Bäumlin, Eric Kummerant, Alain Scaiola, Tanja Schönhut, Jana Ziegelmüller and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 39 citations in OpenAlex.

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  5. SARS-CoV-2 and MERS-CoV disrupt host protein synthesis via nsp1 with differential effects on the integrated stress response.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  16. Giant RNA genomes: Roles of host, translation elongation, genome architecture, and proteome in nidoviruses.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 3 countries.

Katharina SchubertDepartment of Biology, Institute of Molecular Biology and Biophysics, ETH Zurich, Zurich 8049, Switzerland.
Evangelos D KarousisDepartment of Chemistry and Biochemistry, University of Bern, Bern 3012, Switzerland; Multidisciplinary Center for Infectious Diseases, University of Bern, Bern 3012, Switzerland. Electronic address: evangelos.karousis@unibe.ch.
Ivo BanDepartment of Biology, Institute of Molecular Biology and Biophysics, ETH Zurich, Zurich 8049, Switzerland.
Christopher P LapointeDepartment of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Marc LeibundgutDepartment of Biology, Institute of Molecular Biology and Biophysics, ETH Zurich, Zurich 8049, Switzerland.
Emilie BäumlinDepartment of Chemistry and Biochemistry, University of Bern, Bern 3012, Switzerland; Multidisciplinary Center for Infectious Diseases, University of Bern, Bern 3012, Switzerland.
Eric KummerantDepartment of Biology, Institute of Molecular Biology and Biophysics, ETH Zurich, Zurich 8049, Switzerland.
Alain ScaiolaDepartment of Biology, Institute of Molecular Biology and Biophysics, ETH Zurich, Zurich 8049, Switzerland.
Tanja SchönhutDepartment of Biology, Institute of Molecular Biology and Biophysics, ETH Zurich, Zurich 8049, Switzerland.
Jana ZiegelmüllerDepartment of Chemistry and Biochemistry, University of Bern, Bern 3012, Switzerland.
Joseph D PuglisiDepartment of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Oliver MühlemannDepartment of Chemistry and Biochemistry, University of Bern, Bern 3012, Switzerland.
Nenad BanDepartment of Biology, Institute of Molecular Biology and Biophysics, ETH Zurich, Zurich 8049, Switzerland. Electronic address: ban@mol.biol.ethz.ch.
ETH Zurich · CHUniversity of Bern · CHStanford University · US

Funding

Dynamics of TranslationR35GM145306 · NIGMS · STANFORD UNIVERSITY · PI JOSEPH D PUGLISI · 2022 to 2026
$3.8M
Dynamics of eukaryotic translation initiation and its controlR01GM113078 · NIGMS · STANFORD UNIVERSITY · PI PUGLISI, JOSEPH D · 2016 to 2021
$2.9M
Defining modifiers and mechanisms of RAN translationRF1AG064690 · NIA · STANFORD UNIVERSITY · PI GITLER, AARON D., PUGLISI, JOSEPH D · 2019 to 2019
$2.8M
Defining modifiers and mechanisms of RAN translationR01AG064690 · NIA · STANFORD UNIVERSITY · PI Aaron D. Gitler, JOSEPH D PUGLISI · 2024 to 2026
$2.3M
From one end to the other: dynamics of human translation initiation and its controlR00GM144678 · NIGMS · FRED HUTCHINSON CANCER CENTER · PI LAPOINTE, CHRISTOPHER PAUL · 2023 to 2024
$498k
From one end to the other: dynamics of human translation initiation and its controlK99GM144678 · NIGMS · STANFORD UNIVERSITY · PI LAPOINTE, CHRISTOPHER PAUL · 2022 to 2023
$164k
NIA NIH HHS R01 AG064690NIA NIH HHS RF1 AG064690NIGMS NIH HHS K99 GM144678NIGMS NIH HHS R00 GM144678NIGMS NIH HHS R01 GM113078NIGMS NIH HHS R35 GM145306
6 · The paper itself

Abstract

Nonstructural protein 1 (Nsp1) produced by coronaviruses inhibits host protein synthesis. The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Nsp1 C-terminal domain was shown to bind the ribosomal mRNA channel to inhibit translation, but it is unclear whether this mechanism is broadly used by coronaviruses, whether the Nsp1 N-terminal domain binds the ribosome, or how Nsp1 allows viral RNAs to be translated. Here, we investigated Nsp1 from SARS-CoV-2, Middle East respiratory syndrome coronavirus (MERS-CoV), and Bat-Hp-CoV coronaviruses using structural, biophysical, and biochemical experiments, revealing a conserved role for the C-terminal domain. Additionally, the N-terminal domain of Bat-Hp-CoV Nsp1 binds to the decoding center of the 40S subunit, where it would prevent mRNA and eIF1A accommodation. Structure-based experiments demonstrated the importance of decoding center interactions in all three coronaviruses and showed that the same regions of Nsp1 are necessary for the selective translation of viral RNAs. Our results provide a mechanistic framework to understand how Nsp1 controls preferential translation of viral RNAs.

Indexed as

ChiropteraCOVID-19AnimalsProtein DomainsRNA, MessengerSARS-CoV-2Viral Nonstructural ProteinsRNA, MessengerViral Nonstructural Proteinscryoelectron microscopyNsp1ribosomeSARS-CoV-2translation

Identifiers

PMID37802027
PMCPMC10575594
OpenAlexW4387377002

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.