Evidence map›Paper›PMID 37801271›Full record

ArticleJournal, genetic engineering & biotechnology2023

Porphyrin-derived carbon dots for an enhanced antiviral activity targeting the CTD of SARS-CoV-2 nucleocapsid.

Azzania Fibriani, Audrey Angelina Putri Taharuddin, Nicholas Yamahoki, Rebecca Stephanie, Jessica Laurelia, Dian Fitria Agustiyanti, Popi Hadi Wisnuwardhani, Marissa Angelina, Yana Rubiyana, Ratih Asmana Ningrum and 5 more

Open access · diamondAbstract read
In one paragraph

Article in Journal, genetic engineering & biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Natural products as a source of Coronavirus entry inhibitors.Frontiers in cellular and infection microbiology · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Azzania FibrianiSchool of Life Sciences and Technology, Institut Teknologi Bandung, Bandung, 40132, Indonesia. afibriani@itb.ac.id.ORCID http://orcid.org/0000-0003-4319-6966
Audrey Angelina Putri TaharuddinSchool of Life Sciences and Technology, Institut Teknologi Bandung, Bandung, 40132, Indonesia.
Nicholas YamahokiSchool of Life Sciences and Technology, Institut Teknologi Bandung, Bandung, 40132, Indonesia.
Rebecca StephanieSchool of Life Sciences and Technology, Institut Teknologi Bandung, Bandung, 40132, Indonesia.
Jessica LaureliaSchool of Life Sciences and Technology, Institut Teknologi Bandung, Bandung, 40132, Indonesia.
Dian Fitria AgustiyantiResearch Center for Genetic Engineering, Indonesian National Research and Innovation Agency (BRIN), Cibinong, 16911, Indonesia.
Popi Hadi WisnuwardhaniResearch Center for Genetic Engineering, Indonesian National Research and Innovation Agency (BRIN), Cibinong, 16911, Indonesia.
Marissa AngelinaResearch Center for Pharmaceutical Ingredients and Traditional Medicine, Indonesian National Research and Innovation Agency (BRIN), Serpong, 15314, Indonesia.
Yana RubiyanaResearch Center for Genetic Engineering, Indonesian National Research and Innovation Agency (BRIN), Cibinong, 16911, Indonesia.
Ratih Asmana NingrumResearch Center for Genetic Engineering, Indonesian National Research and Innovation Agency (BRIN), Cibinong, 16911, Indonesia.
Andri WardianaResearch Center for Genetic Engineering, Indonesian National Research and Innovation Agency (BRIN), Cibinong, 16911, Indonesia.
Desriani DesrianiResearch Center for Genetic Engineering, Indonesian National Research and Innovation Agency (BRIN), Cibinong, 16911, Indonesia.
Ferry IskandarResearch Center for Nanoscience and Nanotechnology, Institut Teknologi Bandung, Bandung, 40132, Indonesia.
Fitri Aulia PermatasariDepartment of Physics, Faculty of Mathematics and Natural Sciences, Institut Teknologi Bandung, Bandung, 40132, Indonesia.
Ernawati Arifin Giri-RachmanSchool of Life Sciences and Technology, Institut Teknologi Bandung, Bandung, 40132, Indonesia.
Bandung Institute of Technology · IDIndonesian Agency for Agricultural Research and Development · IDNational Research and Innovation Agency · ID

Funding

Badan Riset dan Inovasi Nasional 60/II/HK/2022Institut Teknologi Bandung SITH.PPMI-1-50-2021Lembaga Pengelola Dana Pendidikan RISPRO/KI/B1/KOM/11/4542/2/2020
6 · The paper itself

Abstract

backgroundSince effective antiviral drugs for COVID-19 are still limited in number, the exploration of compounds that have antiviral activity against SARS-CoV-2 is in high demand. Porphyrin is potentially developed as a COVID-19 antiviral drug. However, its low solubility in water restricts its clinical application. Reconstruction of porphyrin into carbon dots is expected to possess better solubility and bioavailability as well as lower biotoxicity. METHODS AND

resultsIn this study, we investigated the antiviral activity of porphyrin and porphyrin-derived carbon dots against SARS-CoV-2. Through the in silico analysis and assessment using a novel drug screening platform, namely dimer-based screening system, we demonstrated the capability of the antivirus candidates in inhibiting the dimerization of the C-terminal domain of SARS-CoV-2 Nucleocapsid. It was shown that porphyrin-derived carbon dots possessed lower cytotoxicity on Vero E6 cells than porphyrin. Furthermore, we also assessed their antiviral activity on the SARS-CoV-2-infected Vero E6 cells. The transformation of porphyrin into carbon dots substantially augmented its performance in disrupting SARS-CoV-2 propagation in vitro.

conclusionsTherefore, this study comprehensively demonstrated the potential of porphyrin-derived carbon dots to be developed further as a promisingly safe and effective COVID-19 antiviral drug.

Indexed as

AntivirusCarbon dotsCoronavirusCOVID-19CytotoxicityDimer-based screening systemNucleocapsidPhytochemicalsPorphyrinSARS-CoV-2

Identifiers

PMID37801271
PMCPMC10558421
OpenAlexW4387392448

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.