Evidence map›Paper›PMID 37798758›Full record

ArticleParasites & vectors2023

A fast and inexpensive genotyping system for the simultaneous analysis of human and Aedes albopictus short tandem repeats.

Andreu Albó Timor, Federica Lucati, Frederic Bartumeus, Jenny Caner, Santi Escartin, Simone Mariani, John R B Palmer, Marc Ventura

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Andreu Albó TimorCentre for Advanced Studies of Blanes (CEAB-CSIC), Blanes, Spain.
Federica LucatiCentre for Advanced Studies of Blanes (CEAB-CSIC), Blanes, Spain. federicalucati@hotmail.com.
Frederic BartumeusCentre for Advanced Studies of Blanes (CEAB-CSIC), Blanes, Spain.
Jenny CanerCentre for Advanced Studies of Blanes (CEAB-CSIC), Blanes, Spain.
Santi EscartinCentre for Advanced Studies of Blanes (CEAB-CSIC), Blanes, Spain.
Simone MarianiCentre for Advanced Studies of Blanes (CEAB-CSIC), Blanes, Spain.
John R B PalmerDepartment of Political and Social Sciences, Universitat Pompeu Fabra (UPF), Barcelona, Spain.
Marc VenturaCentre for Advanced Studies of Blanes (CEAB-CSIC), Blanes, Spain.
Centre d'Estudis Avançats de Blanes · ESInstitució Catalana de Recerca i Estudis Avançats · ESPompeu Fabra University · ES

Funding

HORIZON EUROPE European Research Council 853271
6 · The paper itself

Abstract

backgroundDetermination of the interactions between hematophagous mosquitoes and their human hosts is of great importance for better understanding the transmission dynamics of mosquito-borne arboviruses and developing effective strategies to mitigate risk. Genetic analysis of human and mosquito DNA can play a key role in this, but commercial kits for human short tandem repeat (STR) genotyping are expensive and do not allow for the simultaneous STR analysis of host and vector DNA. Here, we present an inexpensive and straightforward STR-loci multiplex system capable of simultaneously amplifying Aedes albopictus and human STRs from blood-fed mosquitoes. Additionally, we examine the effect of storage methods and post-feeding time on the integrity of host DNA.

methodsThirty-five STRs (16 human and 19 Ae. albopictus STRs) subdivided in three multiplexes were tested for amplification and scoring reliability. Under laboratory conditions we compared the efficacy of two preservation methods (absolute ethanol vs lysis buffer) on the integrity of host DNA in Ae. albopictus blood meals. We also evaluated the effect of post-feeding time by sacrificing blood-fed mosquitoes at different time intervals after feeding, and we assessed our ability to detect multiple feedings. To determine if the system can be employed successfully under field conditions, we carried out a preliminary study using field-collected Ae. albopictus.

resultsAll 35 STRs amplified consistently in the laboratory. Lysis buffer performed better than absolute ethanol in terms of allele peak height and clarity of electropherograms. Complete human DNA profiles could be obtained up to 48 h following the blood meal. Analysis of multiple feedings confirmed that peak heights can be used as a proxy to determine post-feeding time and thus derive the number of different people bitten by a mosquito. In the field trial, amplification was successful for 32 STRs. We found human DNA signal in 38 of the 61 field-collected mosquitoes (62%), of which 34 (89%) had ingested a single blood meal, while four (11%) contained double meals.

conclusionsOur new genotyping system allows fast and reliable screening of both host and vector species, and can be further adapted to other mosquito species living in close contact with humans.

Indexed as

AedesAnimalsDNAEthanolGenotypeHumansMicrosatellite RepeatsMosquito VectorsReproducibility of ResultsDNAEthanolAedes albopictusBlood meal analysisHuman fingerprintingSTR genotypingVector-host interaction

Identifiers

PMID37798758
PMCPMC10557338
OpenAlexW4387378657

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.