Evidence map›Paper›PMID 37798700›Full record

ArticleBMC medical informatics and decision making2023

Development and validation of a case definition for problematic menopause in primary care electronic medical records.

Anh N Q Pham, Michael Cummings, Nese Yuksel, Beate Sydora, Tyler Williamson, Stephanie Garies, Russell Pilling, Cliff Lindeman, Sue Ross

Erratum issuedAbstract read
In one paragraph

Article in BMC medical informatics and decision making, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Anh N Q PhamDepartment of Rehabilitation Medicine, University of Alberta, Edmonton, Canada. anh.pham@ualberta.ca.
Michael CummingsDepartment of Community Health Sciences, University of Calgary, Calgary, Canada.
Nese YukselFaculty of Pharmacy and Pharmaceutical Sciences, College of Health Sciences, University of Alberta, Edmonton, Canada.
Beate SydoraDepartment of Obstetrics and Gynecology, University of Alberta, Edmonton, Canada.
Tyler WilliamsonDepartment of Community Health Sciences, University of Calgary, Calgary, Canada.
Stephanie GariesDepartment of Family Medicine, University of Calgary, Calgary, Canada.
Russell PillingDepartment of Community Health Sciences, University of Calgary, Calgary, Canada.
Cliff LindemanDepartment of Family Medicine, University of Alberta, Edmonton, Canada.
Sue RossDepartment of Obstetrics and Gynecology, University of Alberta, Edmonton, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMenopause is a normal transition in a woman's life. For some women, it is a stage without significant difficulties; for others, menopause symptoms can severely affect their quality of life. This study developed and validated a case definition for problematic menopause using Canadian primary care electronic medical records, which is an essential step in examining the condition and improving quality of care.

methodsWe used data from the Canadian Primary Care Sentinel Surveillance Network including billing and diagnostic codes, diagnostic free-text, problem list entries, medications, and referrals. These data formed the basis of an expert-reviewed reference standard data set and contained the features that were used to train a machine learning model based on classification and regression trees. An ad hoc feature importance measure coupled with recursive feature elimination and clustering were applied to reduce our initial 86,000 element feature set to a few tens of the most relevant features in the data, while class balancing was accomplished with random under- and over-sampling. The final case definition was generated from the tree-based machine learning model output combined with a feature importance algorithm. Two independent samples were used: one for training / testing the machine learning algorithm and the other for case definition validation.

resultsWe randomly selected 2,776 women aged 45-60 for this analysis and created a case definition, consisting of two occurrences within 24 months of International Classification of Diseases, Ninth Revision, Clinical Modification code 627 (or any sub-codes) OR one occurrence of Anatomical Therapeutic Chemical classification code G03CA (or any sub-codes) within the patient chart, that was highly effective at detecting problematic menopause cases. This definition produced a sensitivity of 81.5% (95% CI: 76.3-85.9%), specificity of 93.5% (91.9-94.8%), positive predictive value of 73.8% (68.3-78.6%), and negative predictive value of 95.7% (94.4-96.8%).

conclusionOur case definition for problematic menopause demonstrated high validity metrics and so is expected to be useful for epidemiological study and surveillance. This case definition will enable future studies exploring the management of menopause in primary care settings.

Indexed as

Electronic Health RecordsQuality of LifeAlgorithmsCanadaFemaleHumansMenopausePrimary Health CareCase definitionElectronic medical record phenotypingPrimary care dataProblematic menopause.

Identifiers

PMID37798700
PMCPMC10552357

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.