Evidence map›Paper›PMID 37798337›Full record

ArticleNature plants2023

SHI family transcription factors regulate an interspecific barrier.

Sota Fujii, Eri Yamamoto, Seitaro Ito, Surachat Tangpranomkorn, Yuka Kimura, Hiroki Miura, Nobutoshi Yamaguchi, Yoshinobu Kato, Maki Niidome, Aya Yoshida and 4 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature plants, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Chromosome-scale genome assembly of Malcolmia littorea using long-read sequencing and single-pollen genotyping technologies.DNA research : an international journal for rapid publication of reports on genes and genomes · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Sota Fujii *Graduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo, Japan. a-fujii@g.ecc.u-tokyo.ac.jp.ORCID http://orcid.org/0000-0002-4814-5116
Eri Yamamoto *Graduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo, Japan.
Seitaro ItoGraduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo, Japan.
Surachat TangpranomkornGraduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo, Japan.ORCID http://orcid.org/0000-0003-2076-2240
Yuka KimuraGraduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo, Japan.
Hiroki MiuraGraduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo, Japan.ORCID http://orcid.org/0009-0005-2079-5765
Nobutoshi YamaguchiGraduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, Japan.ORCID http://orcid.org/0000-0003-3738-6157
Yoshinobu KatoGraduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo, Japan.ORCID http://orcid.org/0009-0006-5256-0941
Maki NiidomeGraduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo, Japan.
Aya YoshidaGraduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo, Japan.
Hiroko Shimosato-AsanoGraduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, Japan.
Yuko WadaGraduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, Japan.
Toshiro ItoGraduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, Japan.ORCID http://orcid.org/0000-0002-8206-2787
Seiji TakayamaGraduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo, Japan. a-taka@g.ecc.u-tokyo.ac.jp.ORCID http://orcid.org/0000-0002-1432-487X
The University of Tokyo · JPNara Institute of Science and Technology · JPJapan Science and Technology Agency · JPTokyo Fuji University · JP

Funding

MEXT | Japan Society for the Promotion of Science (JSPS) JP16H01467MEXT | Japan Society for the Promotion of Science (JSPS) JP16H06380MEXT | Japan Society for the Promotion of Science (JSPS) JP16H06464MEXT | Japan Society for the Promotion of Science (JSPS) JP16H06467MEXT | Japan Society for the Promotion of Science (JSPS) JP18H02456MEXT | Japan Society for the Promotion of Science (JSPS) JP18H04776MEXT | Japan Society for the Promotion of Science (JSPS) JP21H05030MEXT | Japan Society for the Promotion of Science (JSPS) JP21H05663MEXT | Japan Society for the Promotion of Science (JSPS) JP22H05172MEXT | Japan Society for the Promotion of Science (JSPS) JP22H05174MEXT | Japan Society for the Promotion of Science (JSPS) JP22H05176MEXT | Japan Society for the Promotion of Science (JSPS) JP23H04968MEXT | Japan Society for the Promotion of Science (JSPS) JP23K17987MEXT | JST | Precursory Research for Embryonic Science and Technology (PRESTO) JPMJPR16Q8
6 · The paper itself

Abstract

Pre-zygotic interspecies incompatibility in angiosperms is an important mechanism to prevent unfavourable hybrids between species. Here we report our identification of STIGMATIC PRIVACY 2 (SPRI2), a transcription factor that has a zinc-finger domain and regulates interspecies barriers in Arabidopsis thaliana, via genome-wide association study. Knockout analysis of SPRI2/SRS7 and its paralogue SPRI2-like/SRS5 demonstrated their necessity in rejecting male pollen from other species within female pistils. Additionally, they govern mRNA transcription of xylan O-acetyltransferases (TBL45 and TBL40) related to cell wall modification, alongside SPRI1, a pivotal transmembrane protein for interspecific pollen rejection. SPRI2/SRS7 is localized as condensed structures in the nucleus formed via liquid-liquid phase separation (LLPS), and a prion-like sequence in its amino-terminal region was found to be responsible for the formation of the condensates. The LLPS-regulated SPRI2/SRS7 discovered in this study may contribute to the establishment of interspecific reproductive barriers through the transcriptional regulation of cell wall modification genes and SPRI1.

Indexed as

ArabidopsisTranscription FactorsGenome-Wide Association StudyPollenReproductionTranscription Factors

Identifiers

PMID37798337
OpenAlexW4387378828

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.