Evidence map›Paper›PMID 37796905›Full record

ArticlePloS one2023

Advanced photon counting CT imaging pipeline for cardiac phenotyping of apolipoprotein E mouse models.

Alex J Allphin, Ali Mahzarnia, Darin P Clark, Yi Qi, Zay Y Han, Prajwal Bhandari, Ketan B Ghaghada, Alexandra Badea, Cristian T Badea

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Alex J AllphinQuantitative Imaging and Analysis Lab, Department of Radiology, Duke University Medical Center, Durham, NC, United States of America.ORCID 0000-0003-2789-705X
Ali MahzarniaQuantitative Imaging and Analysis Lab, Department of Radiology, Duke University Medical Center, Durham, NC, United States of America.ORCID 0000-0003-2252-4529
Darin P ClarkQuantitative Imaging and Analysis Lab, Department of Radiology, Duke University Medical Center, Durham, NC, United States of America.
Yi QiQuantitative Imaging and Analysis Lab, Department of Radiology, Duke University Medical Center, Durham, NC, United States of America.
Zay Y HanQuantitative Imaging and Analysis Lab, Department of Radiology, Duke University Medical Center, Durham, NC, United States of America.
Prajwal BhandariDepartment of Radiology, Baylor College of Medicine, Houston, Texas, United States of America.
Ketan B GhaghadaDepartment of Radiology, Baylor College of Medicine, Houston, Texas, United States of America.
Alexandra BadeaQuantitative Imaging and Analysis Lab, Department of Radiology, Duke University Medical Center, Durham, NC, United States of America.
Cristian T BadeaQuantitative Imaging and Analysis Lab, Department of Radiology, Duke University Medical Center, Durham, NC, United States of America.ORCID 0000-0002-1850-2522
Duke Medical Center · USBaylor College of Medicine · US

Funding

Sex and APOE genotype interact to alter immune regulated metabolism in ADRF1AG057895 · NIA · DUKE UNIVERSITY · PI BADEA, ALEXANDRA, COLTON, CAROL ANNE · 2019 to 2019
$5.8M
Brain networks in mouse models of agingR01AG066184 · NIA · DUKE UNIVERSITY · PI BADEA, ALEXANDRA · 2019 to 2023
$3.8M
Cardiac photon counting CT and its application in studying interactions between Alzheimer's and heart diseaseRF1AG070149 · NIA · DUKE UNIVERSITY · PI BADEA, CRISTIAN T · 2021 to 2022
$2.1M
Multiorgan Photon Counting CT and Machine Learning to Elucidate Aging Mechanisms and InterventionsR01AG070149 · NIA · DUKE UNIVERSITY · PI CRISTIAN T BADEA, Alexandra Badea · 2024 to 2026
$2.1M
Sex and APOE genotype interact to alter immune regulated metabolism in ADR56AG057895 · NIA · DUKE UNIVERSITY · PI BADEA, ALEXANDRA, COLTON, CAROL ANNE · 2017 to 2017
$1.1M
NIA NIH HHS R01 AG066184NIA NIH HHS R01 AG070149NIA NIH HHS R56 AG057895NIA NIH HHS RF1 AG057895NIA NIH HHS RF1 AG070149
6 · The paper itself

Abstract

backgroundCardiovascular disease (CVD) is associated with the apolipoprotein E (APOE) gene and lipid metabolism. This study aimed to develop an imaging-based pipeline to comprehensively assess cardiac structure and function in mouse models expressing different APOE genotypes using photon-counting computed tomography (PCCT).

methods123 mice grouped based on APOE genotype (APOE2, APOE3, APOE4, APOE knockout (KO)), gender, human NOS2 factor, and diet (control or high fat) were used in this study. The pipeline included PCCT imaging on a custom-built system with contrast-enhanced in vivo imaging and intrinsic cardiac gating, spectral and temporal iterative reconstruction, spectral decomposition, and deep learning cardiac segmentation. Statistical analysis evaluated genotype, diet, sex, and body weight effects on cardiac measurements.

resultsOur results showed that PCCT offered high quality imaging with reduced noise. Material decomposition enabled separation of calcified plaques from iodine enhanced blood in APOE KO mice. Deep learning-based segmentation showed good performance with Dice scores of 0.91 for CT-based segmentation and 0.89 for iodine map-based segmentation. Genotype-specific differences were observed in left ventricular volumes, heart rate, stroke volume, ejection fraction, and cardiac index. Statistically significant differences were found between control and high fat diets for APOE2 and APOE4 genotypes in heart rate and stroke volume. Sex and weight were also significant predictors of cardiac measurements. The inclusion of the human NOS2 gene modulated these effects.

conclusionsThis study demonstrates the potential of PCCT in assessing cardiac structure and function in mouse models of CVD which can help in understanding the interplay between genetic factors, diet, and cardiovascular health.

Indexed as

Cardiovascular DiseasesIodineAnimalsApolipoprotein E2Apolipoprotein E3Apolipoprotein E4Apolipoproteins EHumansMiceMice, KnockoutTomography, X-Ray ComputedApolipoprotein E2Apolipoprotein E3Apolipoprotein E4Apolipoproteins EIodine

Identifiers

PMID37796905
PMCPMC10553338
OpenAlexW4387362687

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.