Evidence map›Paper›PMID 37794940›Full record

ArticleFrontiers in plant science2023

Breeding effects on durum wheat traits detected using GWAS and haplotype block analysis.

F Taranto, S Esposito, F Fania, R Sica, S Marzario, G Logozzo, T Gioia, P De Vita

Abstract read
In one paragraph

Article in Frontiers in plant science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

8 authors.

F TarantoItalian National Council of Research (CNR), Institute of Biosciences and Bioresources (IBBR), Bari, Italy.
S EspositoCouncil for Agricultural Research and Economics (CREA), Research Centre for Cereal and Industrial Crops (CREA-CI), Foggia, Italy.
F FaniaCouncil for Agricultural Research and Economics (CREA), Research Centre for Cereal and Industrial Crops (CREA-CI), Foggia, Italy.
R SicaSchool of Agricultural, Forestry, Food and Environmental Sciences, University of Basilicata, Potenza, Italy.
S MarzarioSchool of Agricultural, Forestry, Food and Environmental Sciences, University of Basilicata, Potenza, Italy.
G LogozzoSchool of Agricultural, Forestry, Food and Environmental Sciences, University of Basilicata, Potenza, Italy.
T GioiaSchool of Agricultural, Forestry, Food and Environmental Sciences, University of Basilicata, Potenza, Italy.
P De VitaCouncil for Agricultural Research and Economics (CREA), Research Centre for Cereal and Industrial Crops (CREA-CI), Foggia, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: The recent boosting of genomic data in durum wheat ( Methods: Within this motivation context, 123 durum wheat accessions, classified into three groups: landraces (LR), ancient (OC) and modern cultivars (MC), were evaluated in two locations, for 34 agronomic traits, including UPOV descriptors, to assess the impact of changes that occurred during modern breeding. Results: The association mapping analysis, performed with 4,241 SNP markers and six multi-locus-GWAS models, revealed 28 reliable Quantitative Trait Nucleotides (QTNs) related to plant morphology and kernel-related traits. Some important genes controlling flowering time and plant height were in linkage disequilibrium (LD) decay with QTNs identified in this study. A strong association for yellow berry was found on chromosome 6A ( Discussion: Our findings pave new ways to support the phenotypic characterization necessary for variety registration by using a panel of cost-effectiveness SNP markers associated also to the UPOV descriptors. Moreover, the panel of associated SNPs might represent a reservoir of favourable alleles to use in durum wheat breeding and genetics.

Indexed as

haplotype blocksmulti-locus GWASplant variety protectionquantitative trait nucleotide (QTN)UPOV protocol

Identifiers

PMID37794940
PMCPMC10546023

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.