Evidence map›Paper›PMID 37794696›Full record

ArticleEnvironmental microbiology reports2023

Role of natural transformation in the evolution of small cryptic plasmids in Synechocystis sp. PCC 6803.

Fabian Nies, Tanita Wein, Dustin M Hanke, Benjamin L Springstein, Jaime Alcorta, Claudia Taubenheim, Tal Dagan

Open access · hybridAbstract read
In one paragraph

Article in Environmental microbiology reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Fabian NiesInstitute of General Microbiology, Kiel University, Kiel, Germany.ORCID 0000-0002-6375-3929
Tanita WeinInstitute of General Microbiology, Kiel University, Kiel, Germany.ORCID 0000-0002-4561-9654
Dustin M HankeInstitute of General Microbiology, Kiel University, Kiel, Germany.ORCID 0000-0003-1947-4428
Benjamin L SpringsteinInstitute of General Microbiology, Kiel University, Kiel, Germany.ORCID 0000-0002-3461-5391
Jaime AlcortaDepartment of Molecular Genetics and Microbiology, Biological Sciences Faculty, Pontifical Catholic University of Chile, Santiago, Chile.ORCID 0000-0001-7662-239X
Claudia TaubenheimInstitute of General Microbiology, Kiel University, Kiel, Germany.
Tal DaganInstitute of General Microbiology, Kiel University, Kiel, Germany.ORCID 0000-0002-9042-192X
Christian-Albrechts-Universität zu Kiel · DEPontificia Universidad Católica de Chile · CL

Funding

Chilean National Agency for Research and Development (ANID) 21191763Deutsche Forschungsgemeinschaft 456882089Deutsche Forschungsgemeinschaft RTG2501European Research Council (ERC) 101043835
6 · The paper itself

Abstract

Small cryptic plasmids have no clear effect on the host fitness and their functional repertoire remains obscure. The naturally competent cyanobacterium Synechocystis sp. PCC 6803 harbours several small cryptic plasmids; whether their evolution with this species is supported by horizontal transfer remains understudied. Here, we show that the small cryptic plasmid DNA is transferred in the population exclusively by natural transformation, where the transfer frequency of plasmid-encoded genes is similar to that of chromosome-encoded genes. Establishing a system to follow gene transfer, we compared the transfer frequency of genes encoded in cryptic plasmids pCA2.4 (2378 bp) and pCB2.4 (2345 bp) within and between populations of two Synechocystis sp. PCC 6803 labtypes (termed Kiel and Sevilla). Our results reveal that plasmid gene transfer frequency depends on the recipient labtype. Furthermore, gene transfer via whole plasmid uptake in the Sevilla labtype ranged among the lowest detected transfer rates in our experiments. Our study indicates that horizontal DNA transfer via natural transformation is frequent in the evolution of small cryptic plasmids that reside in naturally competent organisms. Furthermore, we suggest that the contribution of natural transformation to cryptic plasmid persistence in Synechocystis is limited.

Indexed as

SynechocystisDNAPlasmidsDNA

Identifiers

PMID37794696
PMCPMC10667661
OpenAlexW4387357451

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.