Evidence map›Paper›PMID 37794244›Full record

ArticleThe ISME journal2023

Protistan predation selects for antibiotic resistance in soil bacterial communities.

Thi Bao-Anh Nguyen, Michael Bonkowski, Kenneth Dumack, Qing-Lin Chen, Ji-Zheng He, Hang-Wei Hu

Abstract read
In one paragraph

Article in The ISME journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Thi Bao-Anh NguyenSchool of Agriculture, Food and Ecosystem Sciences, Faculty of Science, The University of Melbourne, Parkville, VIC, 3010, Australia. thibaoanhn@unimelb.edu.au.ORCID 0000-0001-6185-2790
Michael BonkowskiTerrestrial Ecology, Institute of Zoology, University of Cologne, Köln, Germany.ORCID 0000-0003-2656-1183
Kenneth DumackTerrestrial Ecology, Institute of Zoology, University of Cologne, Köln, Germany.ORCID 0000-0001-8798-0483
Qing-Lin ChenSchool of Agriculture, Food and Ecosystem Sciences, Faculty of Science, The University of Melbourne, Parkville, VIC, 3010, Australia.ORCID 0000-0002-5648-277X
Ji-Zheng HeSchool of Agriculture, Food and Ecosystem Sciences, Faculty of Science, The University of Melbourne, Parkville, VIC, 3010, Australia.ORCID 0000-0002-9169-8058
Hang-Wei HuSchool of Agriculture, Food and Ecosystem Sciences, Faculty of Science, The University of Melbourne, Parkville, VIC, 3010, Australia. hang-wei.hu@unimelb.edu.au.ORCID 0000-0002-3294-102X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding how antibiotic resistance emerges and evolves in natural habitats is critical for predicting and mitigating antibiotic resistance in the context of global change. Bacteria have evolved antibiotic production as a strategy to fight competitors, predators and other stressors, but how predation pressure of their most important consumers (i.e., protists) affects soil antibiotic resistance genes (ARGs) profiles is still poorly understood. To address this gap, we investigated responses of soil resistome to varying levels of protistan predation by inoculating low, medium and high concentrations of indigenous soil protist suspensions in soil microcosms. We found that an increase in protistan predation pressure was strongly associated with higher abundance and diversity of soil ARGs. High protist concentrations significantly enhanced the abundances of ARGs encoding multidrug (oprJ and ttgB genes) and tetracycline (tetV) efflux pump by 608%, 724% and 3052%, respectively. Additionally, we observed an increase in the abundance of numerous bacterial genera under high protistan pressure. Our findings provide empirical evidence that protistan predation significantly promotes antibiotic resistance in soil bacterial communities and advances our understanding of the biological driving forces behind the evolution and development of environmental antibiotic resistance.

Indexed as

Genes, BacterialSoilAnimalsAnti-Bacterial AgentsBacteriaDrug Resistance, MicrobialEukaryotaPredatory BehaviorSoil MicrobiologyAnti-Bacterial AgentsSoil

Identifiers

PMID37794244
PMCPMC10689782

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.