Evidence map›Paper›PMID 37793790›Full record

ArticleRNA (New York, N.Y.)2023

The pseudotorsional space of RNA.

Leandro Grille, Diego Gallego, Leonardo Darré, Gabriela da Rosa, Federica Battistini, Modesto Orozco, Pablo D Dans

Abstract read
In one paragraph

Article in RNA (New York, N.Y.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Leandro GrilleComputational Biophysics Group, Department of Biological Sciences, CENUR Litoral Norte, Universidad de la República, 50000 Salto, Uruguay.
Diego GallegoMolecular Modelling and Bioinformatics Group, Institute for Research in Biomedicine, The Barcelona Institute of Science and Technology, 08028 Barcelona, Spain.
Leonardo DarréBioinformatics Unit, Institute Pasteur of Montevideo, 11400 Montevideo, Uruguay.
Gabriela da RosaComputational Biophysics Group, Department of Biological Sciences, CENUR Litoral Norte, Universidad de la República, 50000 Salto, Uruguay.
Federica BattistiniMolecular Modelling and Bioinformatics Group, Institute for Research in Biomedicine, The Barcelona Institute of Science and Technology, 08028 Barcelona, Spain.ORCID 0000-0002-7544-0938
Modesto OrozcoMolecular Modelling and Bioinformatics Group, Institute for Research in Biomedicine, The Barcelona Institute of Science and Technology, 08028 Barcelona, Spain modesto.orozco@irbbarcelona.org pdans@pasteur.edu.uy.
Pablo D DansComputational Biophysics Group, Department of Biological Sciences, CENUR Litoral Norte, Universidad de la República, 50000 Salto, Uruguay modesto.orozco@irbbarcelona.org pdans@pasteur.edu.uy.ORCID 0000-0002-5927-372X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The characterization of the conformational landscape of the RNA backbone is rather complex due to the ability of RNA to assume a large variety of conformations. These backbone conformations can be depicted by pseudotorsional angles linking RNA backbone atoms, from which Ramachandran-like plots can be built. We explore here different definitions of these pseudotorsional angles, finding that the most accurate ones are the traditional

Indexed as

ProteinsRNANucleic Acid ConformationProteinsRNAbioinformaticscomputational chemistryconformationsdata miningstructure

Identifiers

PMID37793790
PMCPMC10653382

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.