Evidence map›Paper›PMID 37792772›Full record

ArticlePloS one2023

Negative regulation of angiogenesis and the MAPK pathway may be a shared biological pathway between IS and epilepsy.

Longhui Fu, Beibei Yu, Boqiang Lv, Yunze Tian, Yongfeng Zhang, Huangtao Chen, Shijie Yang, Yutian Hu, Pengyu Ren, Jianzhong Li and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Longhui FuDepartment of Neurourgery, Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, China.ORCID 0000-0002-1025-4018
Beibei YuDepartment of Neurourgery, Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, China.
Boqiang LvDepartment of Neurourgery, Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, China.
Yunze TianDepartment of Neurourgery, Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, China.
Yongfeng ZhangDepartment of Neurourgery, Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, China.
Huangtao ChenDepartment of Neurourgery, Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, China.
Shijie YangDepartment of Neurourgery, Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, China.
Yutian HuDepartment of Neurourgery, Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, China.
Pengyu RenDepartment of Neurourgery, Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, China.
Jianzhong LiDepartment of Thoracic Surgery, Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, China.
Shouping GongDepartment of Neurourgery, Second Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, China.ORCID 0000-0002-1723-938X
Second Affiliated Hospital of Xi'an Jiaotong University · CNXi'an Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ischemia stroke and epilepsy are two neurological diseases that have significant patient and societal burden, with similar symptoms of neurological deficits. However, the underlying mechanism of their co-morbidity are still unclear. In this study, we performed a combined analysis of six gene expression profiles (GSE58294, GSE22255, GSE143272, GSE88723, GSE163654, and GSE174574) to reveal the common mechanisms of IS and epilepsy. In the mouse datasets, 74 genes were co-upregulated and 7 genes were co-downregulated in the stroke and epilepsy groups. Further analysis revealed that the co-expressed differentially expressed genes (DEGs) were involved in negative regulation of angiogenesis and the MAPK signaling pathway, and this was verified by Gene Set Enrichment Analysis of human datasets and single cell RNA sequence of middle cerebral artery occlusion mice. In addition, combining DEGs of human and mouse, PTGS2, TMCC3, KCNJ2, and GADD45B were identified as cross species conserved hub genes. Meanwhile, molecular docking results revealed that trichostatin A and valproic acid may be potential therapeutic drugs. In conclusion, to our best knowledge, this study conducted the first comorbidity analysis of epilepsy and ischemic stroke to identify the potential common pathogenic mechanisms and drugs. The findings may provide an important reference for the further studies on post-stroke epilepsy.

Indexed as

EpilepsyStrokeAnimalsGene Expression ProfilingHumansMiceMolecular Docking SimulationTranscriptome

Identifiers

PMID37792772
PMCPMC10550183
OpenAlexW4387331364

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.