Evidence map›Paper›PMID 37792146›Full record

ArticleBulletin of mathematical biology2023

An Adaptive Generalized Leaky Integrate-and-Fire Model for Hippocampal CA1 Pyramidal Neurons and Interneurons.

Addolorata Marasco, Emiliano Spera, Vittorio De Falco, Annalisa Iuorio, Carmen Alina Lupascu, Sergio Solinas, Michele Migliore

Abstract read
In one paragraph

Article in Bulletin of mathematical biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Large-Scale Mechanistic Models of Brain Circuits with Biophysically and Morphologically Detailed Neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Review
  4. Multiscale modeling of neuronal dynamics in hippocampus CA1.Frontiers in computational neuroscience · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Addolorata MarascoDepartment of Mathematics and Applications, University of Naples Federico II, Via Cintia ed. 5A, 80126, Naples, Italy. marasco@unina.it.ORCID http://orcid.org/0000-0002-8613-7467
Emiliano SperaInstitute of Biophysics, National Research Council, Via Ugo La Malfa 153, 90146, Palermo, Italy.
Vittorio De FalcoScuola Superiore Meridionale, Largo San Marcellino 10, 80138, Naples, Napoli, Italy.
Annalisa IuorioFaculty of Mathematics, University of Vienna, Oskar-Morgenstern-Platz 1, 1090, Vienna, Austria.
Carmen Alina LupascuInstitute of Biophysics, National Research Council, Via Ugo La Malfa 153, 90146, Palermo, Italy.
Sergio SolinasDepartment of Biomedical Science, University of Sassari, Viale San Pietro 23, 07100, Sassari, Italy.
Michele MiglioreInstitute of Biophysics, National Research Council, Via Ugo La Malfa 153, 90146, Palermo, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Full-scale morphologically and biophysically realistic model networks, aiming at modeling multiple brain areas, provide an invaluable tool to make significant scientific advances from in-silico experiments on cognitive functions to digital twin implementations. Due to the current technical limitations of supercomputer systems in terms of computational power and memory requirements, these networks must be implemented using (at least) simplified neurons. A class of models which achieve a reasonable compromise between accuracy and computational efficiency is given by generalized leaky integrate-and fire models complemented by suitable initial and update conditions. However, we found that these models cannot reproduce the complex and highly variable firing dynamics exhibited by neurons in several brain regions, such as the hippocampus. In this work, we propose an adaptive generalized leaky integrate-and-fire model for hippocampal CA1 neurons and interneurons, in which the nonlinear nature of the firing dynamics is successfully reproduced by linear ordinary differential equations equipped with nonlinear and more realistic initial and update conditions after each spike event, which strictly depends on the external stimulation current. A mathematical analysis of the equilibria stability as well as the monotonicity properties of the analytical solution for the membrane potential allowed (i) to determine general constraints on model parameters, reducing the computational cost of an optimization procedure based on spike times in response to a set of constant currents injections; (ii) to identify additional constraints to quantitatively reproduce and predict the experimental traces from 85 neurons and interneurons in response to any stimulation protocol using constant and piecewise constant current injections. Finally, this approach allows to easily implement a procedure to create infinite copies of neurons with mathematically controlled firing properties, statistically indistinguishable from experiments, to better reproduce the full range and variability of the firing scenarios observed in a real network.

Indexed as

Mathematical ConceptsModels, BiologicalHippocampusInterneuronsPyramidal CellsCA1 pyramidal neurons and interneuronsConstant and piecewise constant stimulationsGeneralized leaky integrate-and-fire modelsHippocampusNeuronal modelingNeuron firing properties

Identifiers

PMID37792146
PMCPMC10550887

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.