ArticleBulletin of mathematical biology2023
An Adaptive Generalized Leaky Integrate-and-Fire Model for Hippocampal CA1 Pyramidal Neurons and Interneurons.
Article in Bulletin of mathematical biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.
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4 citing papers in PubMed.
- Visualization and simulation of full-scale point-neuron circuits via the Neural Circuit Visualizer web platform.Scientific reports · 2026Article
- Medical Digital Twin: A Review on Technical Principles and Clinical Applications.Journal of clinical medicine · 2025Review
- Large-Scale Mechanistic Models of Brain Circuits with Biophysically and Morphologically Detailed Neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024Review
- Multiscale modeling of neuronal dynamics in hippocampus CA1.Frontiers in computational neuroscience · 2024Article
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7 authors.
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Abstract
Full-scale morphologically and biophysically realistic model networks, aiming at modeling multiple brain areas, provide an invaluable tool to make significant scientific advances from in-silico experiments on cognitive functions to digital twin implementations. Due to the current technical limitations of supercomputer systems in terms of computational power and memory requirements, these networks must be implemented using (at least) simplified neurons. A class of models which achieve a reasonable compromise between accuracy and computational efficiency is given by generalized leaky integrate-and fire models complemented by suitable initial and update conditions. However, we found that these models cannot reproduce the complex and highly variable firing dynamics exhibited by neurons in several brain regions, such as the hippocampus. In this work, we propose an adaptive generalized leaky integrate-and-fire model for hippocampal CA1 neurons and interneurons, in which the nonlinear nature of the firing dynamics is successfully reproduced by linear ordinary differential equations equipped with nonlinear and more realistic initial and update conditions after each spike event, which strictly depends on the external stimulation current. A mathematical analysis of the equilibria stability as well as the monotonicity properties of the analytical solution for the membrane potential allowed (i) to determine general constraints on model parameters, reducing the computational cost of an optimization procedure based on spike times in response to a set of constant currents injections; (ii) to identify additional constraints to quantitatively reproduce and predict the experimental traces from 85 neurons and interneurons in response to any stimulation protocol using constant and piecewise constant current injections. Finally, this approach allows to easily implement a procedure to create infinite copies of neurons with mathematically controlled firing properties, statistically indistinguishable from experiments, to better reproduce the full range and variability of the firing scenarios observed in a real network.
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