Evidence map›Paper›PMID 37790937›Full record

ArticleFrontiers in immunology2023

Comparative transcriptomic and proteomic signature of lung alveolar macrophages reveals the integrin CD11b as a regulatory hub during pneumococcal pneumonia infection.

Kristina Zec, Stephanie Thiebes, Jenny Bottek, Devon Siemes, Philippa Spangenberg, Duc Viet Trieu, Nils Kirstein, Nirojah Subramaniam, Robin Christ, Diana Klein and 11 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 2 countries.

Kristina ZecInstitute for Experimental Immunology and Imaging, Department of Immunodynamics, University Hospital Essen, Essen, Germany.
Stephanie ThiebesInstitute for Experimental Immunology and Imaging, Department of Immunodynamics, University Hospital Essen, Essen, Germany.
Jenny BottekInstitute for Experimental Immunology and Imaging, Department of Immunodynamics, University Hospital Essen, Essen, Germany.
Devon SiemesInstitute for Experimental Immunology and Imaging, Department of Immunodynamics, University Hospital Essen, Essen, Germany.
Philippa SpangenbergInstitute for Experimental Immunology and Imaging, Department of Immunodynamics, University Hospital Essen, Essen, Germany.
Duc Viet TrieuInstitute for Experimental Immunology and Imaging, Department of Immunodynamics, University Hospital Essen, Essen, Germany.
Nils KirsteinInstitute for Experimental Immunology and Imaging, Department of Immunodynamics, University Hospital Essen, Essen, Germany.
Nirojah SubramaniamInstitute for Experimental Immunology and Imaging, Department of Immunodynamics, University Hospital Essen, Essen, Germany.
Robin ChristInstitute for Experimental Immunology and Imaging, Department of Immunodynamics, University Hospital Essen, Essen, Germany.
Diana KleinInstitute for Cell Biology (Cancer Research), University Hospital Essen, Essen, Germany.
Verena JendrossekInstitute for Cell Biology (Cancer Research), University Hospital Essen, Essen, Germany.
Maria LooseClinic for Urology, Paediatric Urology and Andrology, Justus-Liebig University of Giessen, Giessen, Germany.
Florian WagenlehnerClinic for Urology, Paediatric Urology and Andrology, Justus-Liebig University of Giessen, Giessen, Germany.
Jadwiga JablonskaDepartment of Otorhinolaryngology, University Hospital Essen, University Duisburg-Essen, Essen, Germany.
Thilo BrachtMedical Faculty, Medizinisches Proteom-Center, Ruhr-University Bochum, Bochum, Germany.
Barbara SitekMedical Faculty, Medizinisches Proteom-Center, Ruhr-University Bochum, Bochum, Germany.
Bettina BudeusInstitute of Cell Biology (Cancer Research), Faculty of Medicine, University of Duisburg-Essen, Essen, Germany.
Ludger Klein-HitpassInstitute of Cell Biology (Cancer Research), Faculty of Medicine, University of Duisburg-Essen, Essen, Germany.
Dirk TheegartenInstitute of Pathology, University Hospital Essen, Essen, Germany.
Olga ShevchukInstitute for Experimental Immunology and Imaging, Department of Immunodynamics, University Hospital Essen, Essen, Germany.
Daniel R EngelInstitute for Experimental Immunology and Imaging, Department of Immunodynamics, University Hospital Essen, Essen, Germany.
Essen University Hospital · DEUniversity of Duisburg-Essen · DEJustus-Liebig-Universität Gießen · DEUniversitätsklinikum Knappschaftskrankenhaus Bochum · DEUniversity of Oxford · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Methods: We used a comparative transcriptomic and proteomic approach to provide novel insights into the cellular mechanism that changes the molecular signature of AM during lung infections. Using a tandem mass spectrometry approach to murine cell-sorted AM, we revealed significant proteomic changes upon lung infection with Results: AM showed a strong neutrophil-associated proteomic signature, such as expression of CD11b, MPO, neutrophil gelatinases, and elastases, which was associated with phagocytosis of recruited neutrophils. Transcriptomic analysis indicated intrinsic expression of CD11b by AM. Moreover, comparative transcriptomic and proteomic profiling identified CD11b as the central molecular hub in AM, which influenced neutrophil recruitment, activation, and migration. Discussion: In conclusion, our study provides novel insights into the intrinsic molecular adaptations of AM upon lung infection with

Indexed as

CD11b AntigenPneumonia, PneumococcalAnimalsIntegrinsLungMacrophages, AlveolarMiceProteomicsStreptococcus pneumoniaeTranscriptomeCD11b AntigenIntegrinsalveolar macrophagebioinformaticsinfectionproteomicstranscriptomics

Identifiers

PMID37790937
PMCPMC10544576
OpenAlexW4386864046

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.