Evidence map›Paper›PMID 37790934›Full record

ReviewFrontiers in immunology2023

What do we know about the function of SARS-CoV-2 proteins?

Santiago Justo Arevalo, Adriana Castillo-Chávez, Carmen Sofia Uribe Calampa, Daniela Zapata Sifuentes, César J Huallpa, Gianfranco Landa Bianchi, Romina Garavito-Salini Casas, Mauro Quiñones Aguilar, Roberto Pineda Chavarría

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in immunology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Trial
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  12. Interactions of SARS-CoV-2 with Human Target Cells-A Metabolic View.International journal of molecular sciences · 2024
    Review
  13. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Santiago Justo ArevaloFacultad de Ciencias Biológicas, Universidad Ricardo Palma, Lima, Peru.
Adriana Castillo-ChávezFacultad de Ciencias Biológicas, Universidad Ricardo Palma, Lima, Peru.
Carmen Sofia Uribe CalampaFacultad de Ciencias Biológicas, Universidad Ricardo Palma, Lima, Peru.
Daniela Zapata SifuentesFacultad de Ciencias Biológicas, Universidad Ricardo Palma, Lima, Peru.
César J HuallpaFacultad de Ciencias, Universidad Nacional Agraria La Molina, Lima, Peru.
Gianfranco Landa BianchiFacultad de Ciencias Biológicas, Universidad Ricardo Palma, Lima, Peru.
Romina Garavito-Salini CasasFacultad de Ciencias Biológicas, Universidad Ricardo Palma, Lima, Peru.
Mauro Quiñones AguilarFacultad de Ciencias Biológicas, Universidad Ricardo Palma, Lima, Peru.
Roberto Pineda ChavarríaFacultad de Ciencias Biológicas, Universidad Ricardo Palma, Lima, Peru.
Universidad Ricardo Palma · PENational Agrarian University · PE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The COVID-19 pandemic has highlighted the importance in the understanding of the biology of SARS-CoV-2. After more than two years since the first report of COVID-19, it remains crucial to continue studying how SARS-CoV-2 proteins interact with the host metabolism to cause COVID-19. In this review, we summarize the findings regarding the functions of the 16 non-structural, 6 accessory and 4 structural SARS-CoV-2 proteins. We place less emphasis on the spike protein, which has been the subject of several recent reviews. Furthermore, comprehensive reviews about COVID-19 therapeutic have been also published. Therefore, we do not delve into details on these topics; instead we direct the readers to those other reviews. To avoid confusions with what we know about proteins from other coronaviruses, we exclusively report findings that have been experimentally confirmed in SARS-CoV-2. We have identified host mechanisms that appear to be the primary targets of SARS-CoV-2 proteins, including gene expression and immune response pathways such as ribosome translation, JAK/STAT, RIG-1/MDA5 and NF-kβ pathways. Additionally, we emphasize the multiple functions exhibited by SARS-CoV-2 proteins, along with the limited information available for some of these proteins. Our aim with this review is to assist researchers and contribute to the ongoing comprehension of SARS-CoV-2's pathogenesis.

Indexed as

COVID-19SARS-CoV-2HumansPandemicsSpike Glycoprotein, CoronavirusSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2COVID-19immune pathwayspandemictranslation inhibitionviral infection

Identifiers

PMID37790934
PMCPMC10544941
OpenAlexW4386850142

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.