Evidence map›Paper›PMID 37790377›Full record

ArticlebioRxiv : the preprint server for biology2023

Glutamylation of Npm2 and Nap1 acidic disordered regions increases DNA charge mimicry to enhance chaperone efficiency.

Benjamin M Lorton, Christopher Warren, Humaira Ilyas, Prithviraj Nandigrami, Subray Hegde, Sean Cahill, Stephanie M Lehman, Jeffrey Shabanowitz, Donald F Hunt, Andras Fiser and 2 more

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 5 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Benjamin M LortonDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461.
Christopher WarrenDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461.
Humaira IlyasDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461.
Prithviraj NandigramiDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461.
Subray HegdeDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461.
Sean CahillDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461.
Stephanie M LehmanDepartment of Chemistry, University of Virginia, Charlottesville, VA 22904.
Jeffrey ShabanowitzDepartment of Chemistry, University of Virginia, Charlottesville, VA 22904.
Donald F HuntDepartment of Chemistry, University of Virginia, Charlottesville, VA 22904.
Andras FiserDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461.
David CowburnDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461.
David ShechterDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461.
Albert Einstein College of Medicine · USUniversity of Virginia · USGlaxoSmithKline (United States) · USMerck & Co., Inc., Rahway, NJ, USA (United States) · US

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI THOMAS E ROHAN · 1985 to 2026
$111.2M
PROTEIN SEQUENCING BY TANDEM MASS SPECTROMETRYR01GM037537 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI HUNT, DONALD F · 1987 to 2023
$17.8M
TRAINING PROGRAM IN CELLULAR &MOLEC. BIOLOGY &GENETICST32GM007491 · NIGMS · YESHIVA UNIVERSITY · PI QUERY, CHARLES C · 1985 to 2021
$17.0M
Molecular basis of recognition in the Immunological SynapseR35GM136357 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI FISER, ANDRAS · 2020 to 2024
$2.7M
Molecular basis of receptor-ligand recognition in the Immunological SynapseR01GM118709 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI FISER, ANDRAS · 2016 to 2019
$2.3M
Interdisciplinary protein engineering approach to design high affinity antibodies for flavivirusesR01AI141816 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI FISER, ANDRAS · 2019 to 2023
$2.1M
EXTRAMURAL RESEARCH FACILITIES CONSTRUCTIONC06RR015495 · NCRR · NEW YORK STRUCTURAL BIOLOGY CENTER · PI RIFKIND, RICHARD A · 2000 to 2000
$2.0M
Regulation of Histone Chaperone Function by GlutamylationR01GM135614 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI SHECHTER, DAVID · 2020 to 2023
$1.6M
Acquisition of 700 MHz NMR SpectrometerS10OD018509 · OD · NEW YORK STRUCTURAL BIOLOGY CENTER · PI PALMER, ARTHUR G · 2015 to 2015
$1.1M
Upgrade of 800 MHz SpectrometerS10OD016432 · OD · NEW YORK STRUCTURAL BIOLOGY CENTER · PI PALMER, ARTHUR G · 2014 to 2014
$600k
Console and probe upgrade for 600 MHz NMRS10OD016305 · OD · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI COWBURN, DAVID · 2014 to 2014
$595k
Regulation of Histone Chaperone Function by GlutamylationF31GM116536 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI WARREN, CHRISTOPHER · 2016 to 2017
$88k
NCI NIH HHS P30 CA013330NCRR NIH HHS C06 RR015495NIAID NIH HHS R01 AI141816NIGMS NIH HHS F31 GM116536NIGMS NIH HHS R01 GM037537NIGMS NIH HHS R01 GM118709NIGMS NIH HHS R01 GM135614NIGMS NIH HHS R35 GM136357NIGMS NIH HHS T32 GM007491NIH HHS S10 OD016305NIH HHS S10 OD016432NIH HHS S10 OD018509
6 · The paper itself

Abstract

Histone chaperones-structurally diverse, non-catalytic proteins enriched with acidic intrinsically disordered regions (IDRs)-protect histones from spurious nucleic acid interactions and guide their deposition into and out of nucleosomes. Despite their conservation and ubiquity, the function of the chaperone acidic IDRs remains unclear. Here, we show that the

Indexed as

acidic IDRacidic stretchchromatinDNA replicationepigeneticsfarnesylationglutamate-glutamylationglutamylationhistone chaperoneIDRMDmolecular dynamicsN1Nap1NAP1L1NASPNMRNpm2nuclear magnetic resonancenucleosomenucleuspolyelectrolyteTTLL4

Identifiers

PMID37790377
PMCPMC10542154
OpenAlexW4386894295

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.