Evidence map›Paper›PMID 37790327›Full record

ArticleResearch square2023

Increased AID Results in Mutations at the CRLF2 Locus Implicated in Latin American ALL Health Disparities.

Nicholas Pannunzio, Valeria Rangel, Jason Sterrenberg, Aya Garawi, Vyanka Mezcord, Melissa Folkerts, Sabrina Caulderon, Jinglong Wang, Eli Soyfer, Oliver Eng and 7 more

Open access · greenAbstract readPreprint
In one paragraph

Article in Research square, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 1 country.

Nicholas PannunzioUC Irvine.ORCID 0000-0002-8290-8236
Valeria RangelUC Irvine.
Jason SterrenbergUC Irvine.
Aya GarawiUC Irvine.
Vyanka MezcordCalifornia State University Fullerton.
Melissa FolkertsUC Irvine.
Sabrina CaulderonUC Irvine.
Jinglong WangStanford University.
Eli SoyferUC Irvine.
Oliver EngUC Irvine.
Jennifer ValerinUC Irvine.
Sora TanjasiriUC Irvine.
Fabiola Quintero-RiveraUC Irvine.
Selma MasriUniversity of California, Irvine.
Marcus SeldinUniversity of California, Irvine.ORCID 0000-0001-8026-4759
Richard FrockStanford University.ORCID 0000-0001-6963-4931
Angela FleischmanUniversity of California, Irvine.ORCID 0000-0002-3701-6079
UC Irvine Health · USUniversity of California, Irvine · USStanford University · USCalifornia State University, Fullerton · US

Funding

Circadian Clock and Myc-dependent Regulation of Cellular TransformationR01CA259370 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Selma Masri · 2022 to 2026
$3.0M
Circadian Clock Disruption and Colorectal CancerR01CA244519 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Selma Masri · 2020 to 2026
$3.0M
Rapid detection of CRLF2 rearrangements in Hispanic Ph-like ALL patients to access diagnosis and relapseR37CA266042 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Nicholas Pannunzio · 2022 to 2026
$2.5M
Aberrant V(D)J recombination in B cells initiates lymphoid malignancyR01CA276470 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Nicholas Pannunzio · 2024 to 2026
$1.0M
Summer Mentoring and Research Training (SMART)T35DK128788 · NIDDK · UNIVERSITY OF CALIFORNIA-IRVINE · PI GUPTA, KALPNA, RHEE, CONNIE MEEYOUNG · 2021 to 2025
$375k
NCI NIH HHS R01 CA244519NCI NIH HHS R01 CA259370NCI NIH HHS R01 CA276470NCI NIH HHS R37 CA266042NIDDK NIH HHS T35 DK128788
6 · The paper itself

Abstract

Activation-induced cytidine deaminase (AID) is a B cell-specific base editor required during class switch recombination and somatic hypermutation for B cell maturation and antibody diversification. However, it has also been implicated as a factor in the etiology of several B cell malignancies. Evaluating the AID-induced mutation load in patients at-risk for certain types of blood cancers is critical in assessing disease severity and treatment options. Here, we have developed a digital PCR (dPCR) assay that allows us to track the mutational landscape resulting from AID modification or DNA double-strand break (DSB) formation and repair at sites known to be prone to DSBs. Implementation of this new assay showed that increased AID levels in immature B cells increases genome instability at loci linked to translocation formation. This included the

Identifiers

PMID37790327
PMCPMC10543404
OpenAlexW4386600570

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.