Evidence map›Paper›PMID 37789449›Full record

ArticleEnvironmental microbiome2023

Fungal community inside lichen: a curious case of sparse diversity and high modularity.

Jiho Yang, Jung-Jae Woo, Seung-Yoon Oh, Wonyong Kim, Jae-Seoun Hur

Open access · goldAbstract read
In one paragraph

Article in Environmental microbiome, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 7 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jiho YangKorean Lichen Research Institute, Sunchon National University, 255 Jungang-ro, Suncheon, 57922, South Korea.
Jung-Jae WooKorean Lichen Research Institute, Sunchon National University, 255 Jungang-ro, Suncheon, 57922, South Korea.
Seung-Yoon OhDepartment of Biology and Chemistry, Changwon National University, 20 Changwondaehak-ro, Changwon, 51140, South Korea.
Wonyong KimKorean Lichen Research Institute, Sunchon National University, 255 Jungang-ro, Suncheon, 57922, South Korea.
Jae-Seoun HurKorean Lichen Research Institute, Sunchon National University, 255 Jungang-ro, Suncheon, 57922, South Korea. jshur1@scnu.ac.kr.
Sunchon National University · KRChangwon National University · KR

Funding

National Research Foundation of Korea NRF-2020R1I1A2073283
6 · The paper itself

Abstract

backgroundLichens represent not only the mutualism of fungal and photosynthetic partners but also are composed of microbial consortium harboring diverse fungi known as endolichenic fungi. While endolichenic fungi are known to exert a remarkable influence on lichen ecology through their crucial roles in nutrient cycling, bioprospecting and biodiversity, the enigmatic community structures of these fungal inhabitants remain shrouded in mystery, awaiting further exploration and discovery. To address knowledge gap, we conducted metabarcoding on two lichens using 18S gene amplification, Dirinara applanta and Parmotrema tinctorum, and compared their microbial communities to those found in the pine bark to which the lichens were attached. Our hypothesis was that the endolichenic communities would exhibit distinct diversity patterns, community structures, network structures, and specialist composition compared to the surrounding epiphytic community.

resultsOur investigation has shed light on the clear demarcation between the endolichenic and epiphytic fungal communities, as they exhibit markedly different characteristics that set them apart from each other. This research demonstrated that the endolichenic communities are less diverse as compared to the epiphytic communities. Through community similarity analysis, we observed that two endolichenic communities are more similar to each other in terms of community composition than with the adjacent epiphytic communities. Moreover, we unveiled a striking contrast in the network structures between the endolichenic and epiphytic communities, as the former displayed a more modular and less nested features that is evocative of a potent host-filtration mechanism.

conclusionsThrough our investigation, we have discovered that lichens harbor less intricate and interconnected fungal communities compared to the neighboring epiphytic environment. These observations provide valuable insights into the metagenomic architecture of lichens and offer a tantalizing glimpse into the unique mycobiome.

Indexed as

Community structureDiversityEndolichenic fungiLichenNetwork

Identifiers

PMID37789449
PMCPMC10548754
OpenAlexW4387301290

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.