Evidence map›Paper›PMID 37789208›Full record

ArticleCommunications biology2023

Multidrug resistance plasmids underlie clonal expansions and international spread of Salmonella enterica serotype 1,4,[5],12:i:- ST34 in Southeast Asia.

Hao Chung The, Phuong Pham, Tuyen Ha Thanh, Linh Vo Kim Phuong, Nguyen Phuong Yen, Son-Nam H Le, Duong Vu Thuy, Tran Thi Hong Chau, Hoang Le Phuc, Nguyen Minh Ngoc and 6 more

Abstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Article
  3. Genomic epidemiology ofOne health (Amsterdam, Netherlands) · 2026
    Article
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  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Localization of the origin of transfer for Salmonella genomic island 4 from Salmonella enterica serovar I 4,[5],12:i:.DNA research : an international journal for rapid publication of reports on genes and genomes · 2025
    Article
  13. Genomic Evidence for the Rise ofPathogens (Basel, Switzerland) · 2025
    Article
  14. Article
  15. Genomic diversity of non-typhoidalMicrobial genomics · 2025
    Article
  16. Prevalence ofChina CDC weekly · 2025
    Article
  17. Article
  18. Article
  19. Genomic characterization of a clonal emergentApplied and environmental microbiology · 2024
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Hao Chung TheOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam. haoct@oucru.org.ORCID http://orcid.org/0000-0002-4028-4074
Phuong PhamOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Tuyen Ha ThanhOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Linh Vo Kim PhuongOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Nguyen Phuong YenOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Son-Nam H LeOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.ORCID http://orcid.org/0000-0002-8131-5885
Duong Vu ThuyChildren's Hospital No. 1, Ho Chi Minh City, Vietnam.
Tran Thi Hong ChauOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Hoang Le PhucChildren's Hospital No. 1, Ho Chi Minh City, Vietnam.
Nguyen Minh NgocChildren's Hospital No. 2, Ho Chi Minh City, Vietnam.
Lu Lan ViThe Hospital for Tropical Diseases, Ho Chi Minh City, Vietnam.
Alison E MatherQuadram Institute Bioscience, Norwich Research Park, Norwich, UK.ORCID http://orcid.org/0000-0001-6513-3515
Guy E ThwaitesOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.ORCID http://orcid.org/0000-0002-2858-2087
Nicholas R ThomsonLondon School of Hygiene and Tropical Medicine, London, UK.ORCID http://orcid.org/0000-0002-4432-8505
Stephen BakerDepartment of Medicine, Cambridge Institute of Therapeutic Immunology and Infectious Diseases (CITIID), University of Cambridge, Cambridge, UK.ORCID http://orcid.org/0000-0003-1308-5755
Duy Thanh PhamOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.

Funding

Biotechnology and Biological Sciences Research Council BB/R01250Biotechnology and Biological Sciences Research Council BBS/E/F/000PR10348
6 · The paper itself

Abstract

Salmonella enterica serotype 1,4,[5],12:i:- (Typhimurium monophasic variant) of sequence type (ST) 34 has emerged as the predominant pandemic genotype in recent decades. Despite increasing reports of resistance to antimicrobials in Southeast Asia, Salmonella ST34 population structure and evolution remained understudied in the region. Here we performed detailed genomic investigations on 454 ST34 genomes collected from Vietnam and diverse geographical sources to elucidate the pathogen's epidemiology, evolution and antimicrobial resistance. We showed that ST34 has been introduced into Vietnam in at least nine occasions since 2000, forming five co-circulating major clones responsible for paediatric diarrhoea and bloodstream infection. Most expansion events were associated with acquisitions of large multidrug resistance plasmids of IncHI2 or IncA/C2. Particularly, the self-conjugative IncA/C2 pST34VN2 (co-transferring bla

Indexed as

Anti-Infective AgentsSalmonella entericaAsia, SoutheasternChildDrug Resistance, Multiple, BacterialHumansPlasmidsSalmonellaSerogroupAnti-Infective Agents

Identifiers

PMID37789208
PMCPMC10547704

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.