Evidence map›Paper›PMID 37789031›Full record

ArticleScientific reports2023

Epidemiology and analysis of SARS-CoV-2 Omicron subvariants BA.1 and 2 in Taiwan.

Li-Teh Liu, Shyh-Shin Chiou, Po-Chih Chen, Chun-Hong Chen, Ping-Chang Lin, Ching-Yi Tsai, Wan-Long Chuang, Shang-Jyh Hwang, Inn-Wen Chong, Jih-Jin Tsai

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Li-Teh LiuDepartment of Medical Laboratory Science and Biotechnology, College of Medical Technology, Chung Hwa University of Medical Technology, Tainan City, Taiwan.
Shyh-Shin ChiouGraduate Institute of Clinical Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung City, Taiwan.
Po-Chih ChenDepartment of Laboratory Medicine, Kaohsiung Medical University Hospital, Kaohsiung City, Taiwan.
Chun-Hong ChenNational Mosquito-Borne Diseases Control Research Center, National Health Research Institutes, Zhunan, Miaoli County, Taiwan.
Ping-Chang LinTropical Medicine Center, Kaohsiung Medical University Hospital, Kaohsiung City, Taiwan.
Ching-Yi TsaiTropical Medicine Center, Kaohsiung Medical University Hospital, Kaohsiung City, Taiwan.
Wan-Long ChuangSchool of Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung City, Taiwan.
Shang-Jyh HwangSchool of Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung City, Taiwan.
Inn-Wen ChongDepartment of Internal Medicine and Graduate Institute of Medicine, Kaohsiung Medical University, Kaohsiung City, Taiwan.
Jih-Jin TsaiTropical Medicine Center, Kaohsiung Medical University Hospital, Kaohsiung City, Taiwan. jijits@cc.kmu.edu.tw.ORCID http://orcid.org/0000-0003-2226-8916
Kaohsiung Medical University · TWChung Hwa University of Medical Technology · TWNational Health Research Institutes · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Omicron variant of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), first detected in October 2021, possessed many mutations compared to previous variants. We aimed to identify and analyze SARS-CoV-2 Omicron subvariants among coronavirus disease 2019 (COVID-19) patients between January 2022 and September 2022 in Taiwan. The results revealed that BA.2.3.7, featuring K97E and G1251V in the spike protein compared with BA.2, emerged in March 2022 and persistently dominated between April 2022 and August 2022, resulting in the largest COVID-19 outbreak since 2020. The accumulation of amino acid (AA) variations, mainly AA substitution, in the spike protein was accompanied by increasing severity in Omicron-related COVID-19 between April 2022 and January 2023. Older patients were more likely to have severe COVID-19, and comorbidity was a risk factor for COVID-19-related mortality. The accumulated case fatality rate (CFR) dropped drastically after Omicron variants, mainly BA.2.3.7, entered Taiwan after April 2022, and the CFR was 0.16% in Taiwan, which was lower than that worldwide (0.31%) between April 2021 and January 2023. The relatively low CFR in Omicron-related COVID-19 patients can be attributed to adjustments to public health policies, promotion of vaccination programs, effective antiviral drugs, and the lower severity of the Omicron variant.

Indexed as

COVID-19SARS-CoV-2HumansSpike Glycoprotein, CoronavirusTaiwanSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2

Identifiers

PMID37789031
PMCPMC10547678
OpenAlexW4387300152

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.