Evidence map›Paper›PMID 37788315›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

The duplication of genomes and genetic networks and its potential for evolutionary adaptation and survival during environmental turmoil.

Mehrshad Ebadi, Quinten Bafort, Eshchar Mizrachi, Pieter Audenaert, Pieter Simoens, Marc Van Montagu, Dries Bonte, Yves Van de Peer

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Ecological opportunity and the onset of polyploid niche expansion waves.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Polyploidy: A macromutational force pushing bioeconomic developments.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Evolutionary analysis ofFrontiers in plant science · 2026
    Article
  11. Article
  12. Article
  13. Review
  14. Climate change and plant genomic plasticity.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mehrshad EbadiDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Gent 9052, Belgium.
Quinten BafortDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Gent 9052, Belgium.
Eshchar MizrachiDepartment of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria 0028, South Africa.
Pieter AudenaertDepartment of Information Technology-IDLab, Ghent University-IMEC, Gent 9052, Belgium.
Pieter SimoensDepartment of Information Technology-IDLab, Ghent University-IMEC, Gent 9052, Belgium.
Marc Van MontaguDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Gent 9052, Belgium.ORCID 0000-0003-4711-5131
Dries BonteDepartment of Biology, Terrestrial Ecology Unit, Ghent University, Ghent 9000, Belgium.ORCID 0000-0002-3320-7505
Yves Van de PeerDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Gent 9052, Belgium.ORCID 0000-0003-4327-3730

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The importance of whole-genome duplication (WGD) for evolution is controversial. Whereas some view WGD mainly as detrimental and an evolutionary dead end, there is growing evidence that polyploidization can help overcome environmental change, stressful conditions, or periods of extinction. However, despite much research, the mechanistic underpinnings of why and how polyploids might be able to outcompete or outlive nonpolyploids at times of environmental upheaval remain elusive, especially for autopolyploids, in which heterosis effects are limited. On the longer term, WGD might increase both mutational and environmental robustness due to redundancy and increased genetic variation, but on the short-or even immediate-term, selective advantages of WGDs are harder to explain. Here, by duplicating artificially generated Gene Regulatory Networks (GRNs), we show that duplicated GRNs-and thus duplicated genomes-show higher signal output variation than nonduplicated GRNs. This increased variation leads to niche expansion and can provide polyploid populations with substantial advantages to survive environmental turmoil. In contrast, under stable environments, GRNs might be maladaptive to changes, a phenomenon that is exacerbated in duplicated GRNs. We believe that these results provide insights into how genome duplication and (auto)polyploidy might help organisms to adapt quickly to novel conditions and to survive ecological uproar or even cataclysmic events.

Indexed as

Gene DuplicationGene Regulatory NetworksEvolution, MolecularGenomeGenome, PlantHumansPolyploidycataclysmic eventsenvironmental turmoilgene regulatory networkspolyploidywhole-genome duplication

Identifiers

PMID37788315
PMCPMC10576144

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.