Evidence map›Paper›PMID 37783870›Full record

ArticleCommunications biology2023

Fast functional mapping of ligand-gated ion channels.

Ralf Schmauder, Thomas Eick, Eckhard Schulz, Günther Sammler, Elmar Voigt, Günter Mayer, Holger Ginter, Günter Ditze, Klaus Benndorf

Abstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ralf SchmauderInstitut für Physiologie II, Universitätsklinikum Jena, Friedrich-Schiller-Universität Jena, 07743, Jena, Germany. Ralf.Schmauder@med.uni-jena.ORCID http://orcid.org/0000-0002-8441-4264
Thomas EickInstitut für Physiologie II, Universitätsklinikum Jena, Friedrich-Schiller-Universität Jena, 07743, Jena, Germany.
Eckhard SchulzHochschule Schmalkalden, Fakultät Elektrotechnik, Blechhammer, 98574, Schmalkalden, Germany.
Günther SammlerZentrale Forschungswerkstätten, Universitätsklinikum Jena, Friedrich-Schiller-Universität Jena, 07743, Jena, Germany.
Elmar VoigtLeibniz Institut für Photonische Technologien e.V., Albert-Einstein-Straße 9, 07745, Jena, Germany.
Günter MayerLeibniz Institut für Photonische Technologien e.V., Albert-Einstein-Straße 9, 07745, Jena, Germany.
Holger GinterZentrale Forschungswerkstätten, Universitätsklinikum Jena, Friedrich-Schiller-Universität Jena, 07743, Jena, Germany.
Günter DitzeZentrale Forschungswerkstätten, Universitätsklinikum Jena, Friedrich-Schiller-Universität Jena, 07743, Jena, Germany.
Klaus BenndorfInstitut für Physiologie II, Universitätsklinikum Jena, Friedrich-Schiller-Universität Jena, 07743, Jena, Germany. Klaus.Benndorf@med.uni-jena.de.ORCID http://orcid.org/0000-0002-0707-4083

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ligand-gated ion channels are formed by three to five subunits that control the opening of the pore in a cooperative fashion. We developed a microfluidic chip-based technique for studying ion currents and fluorescence signals in either excised membrane patches or whole cells to measure activation and deactivation kinetics of the channels as well as ligand binding and unbinding when using confocal patch-clamp fluorometry. We show how this approach produces in a few seconds either unidirectional concentration-activation relationships at or near equilibrium and, moreover, respective time courses of activation and deactivation for a large number of freely designed steps of the ligand concentration. The short measuring period strongly minimizes the contribution of disturbing superimposing effects such as run-down phenomena and desensitization effects. To validate gating mechanisms, complex kinetic schemes are quantified without the requirement to have data at equilibrium. The new method has potential for functionally analyzing any ligand-gated ion channel and, beyond, also for other receptors.

Indexed as

Ligand-Gated Ion ChannelsLigandsLigand-Gated Ion ChannelsLigands

Identifiers

PMID37783870
PMCPMC10545696

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.