Evidence map›Paper›PMID 37783808›Full record

ArticleCell biology and toxicology2023

Single-cell RNA sequencing reveals differences between force application and bearing in ankle cartilage.

Junjie Wang, Zewen Sun, Chenghao Yu, Haibo Zhao, Mingyue Yan, Shenjie Sun, Xu Han, Tingting Jiang, Tianrui Wang, Tengbo Yu and 1 more

Abstract read
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In one paragraph

Article in Cell biology and toxicology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Junjie WangQingdao Medical College, Qingdao University, Qingdao, China.
Zewen SunQingdao Medical College, Qingdao University, Qingdao, China.
Chenghao YuQingdao Medical College, Qingdao University, Qingdao, China.
Haibo ZhaoQingdao Medical College, Qingdao University, Qingdao, China.
Mingyue YanQingdao Medical College, Qingdao University, Qingdao, China.
Shenjie SunQingdao Medical College, Qingdao University, Qingdao, China.
Xu HanQingdao Medical College, Qingdao University, Qingdao, China.
Tingting JiangLC-Bio Technologies, Co., Ltd., Hangzhou, China.
Tianrui WangDepartment of Orthopaedic Surgery, The Affiliated Hospital of Qingdao University, Qingdao, China. wangtr@qdu.edu.cn.
Tengbo YuDepartment of Orthopaedic Surgery, Qingdao Hospital of the University of Health and Rehabilitation Sciences (Qingdao Municipal Hospital), Qingdao, China. ytb1970@163.com.
Yingze ZhangDepartment of Orthopaedic Surgery, The Affiliated Hospital of Qingdao University, Qingdao, China.
Qingdao University · CNAffiliated Hospital of Qingdao University · CNQingdao Municipal Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chondrocytes are the major functional elements of articular cartilage. Force has been demonstrated to influence the structure and function of articular cartilage and chondrocytes. Therefore, it is necessary to evaluate chondrocytes under different force conditions to gain deep insight into chondrocyte function. Six cartilage tissues from the distal tibia (referred to as the AT group) and five cartilage tissues from the trochlear surface of the talus (referred to as the ATa group) were obtained from 6 donors who had experienced fatal accidents. Single-cell RNA sequencing was used on these samples. A total of 149,816 cells were analyzed. Nine chondrocyte subsets were ultimately identified. Pseudotime analyses, enrichment analyses, cell-cell interaction studies, and single-cell regulatory network inference and clustering were performed for each cell type, and the differences between the AT and ATa groups were analyzed. Immunohistochemical staining was used to verify the existence of each chondrocyte subset and its distribution. The results suggested that reactive oxygen species related processes were active in the force-applied region, while tissue repair processes were common in the force-bearing region. Although the number of prehypertrophic chondrocytes was small, these chondrocytes seemed to play an important role in the ankle.

Indexed as

AnkleCartilage, ArticularChondrocytesReactive Oxygen SpeciesSequence Analysis, RNAReactive Oxygen SpeciesAnkleCartilageChondrocyteForceSingle-cell RNA sequencing

Identifiers

PMID37783808
OpenAlexW4387244208

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.