Evidence map›Paper›PMID 37782012›Full record

ArticleeLife2023

Estimating the true stability of the prehydrolytic outward-facing state in an ABC protein.

Márton A Simon, Iordan Iordanov, Andras Szollosi, László Csanády

Open access · goldAbstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Márton A SimonDepartment of Biochemistry, Semmelweis University, Budapest, Hungary.
Iordan IordanovDepartment of Biochemistry, Semmelweis University, Budapest, Hungary.ORCID https://orcid.org/0000-0001-8251-5857
Andras SzollosiDepartment of Biochemistry, Semmelweis University, Budapest, Hungary.ORCID https://orcid.org/0000-0002-5570-4609
László CsanádyDepartment of Biochemistry, Semmelweis University, Budapest, Hungary.ORCID https://orcid.org/0000-0002-6547-5889
Semmelweis University · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CFTR, the anion channel mutated in cystic fibrosis patients, is a model ABC protein whose ATP-driven conformational cycle is observable at single-molecule level in patch-clamp recordings. Bursts of CFTR pore openings are coupled to tight dimerization of its two nucleotide-binding domains (NBDs) and in wild-type (WT) channels are mostly terminated by ATP hydrolysis. The slow rate of non-hydrolytic closure - which determines how tightly bursts and ATP hydrolysis are coupled - is unknown, as burst durations of catalytic site mutants span a range of ~200-fold. Here, we show that Walker A mutation K1250A, Walker B mutation D1370N, and catalytic glutamate mutations E1371S and E1371Q all completely disrupt ATP hydrolysis. True non-hydrolytic closing rate of WT CFTR approximates that of K1250A and E1371S. That rate is slowed ~15-fold in E1371Q by a non-native inter-NBD H-bond, and accelerated ~15-fold in D1370N. These findings uncover unique features of the NBD interface in human CFTR.

Indexed as

Adenosine TriphosphateCystic Fibrosis Transmembrane Conductance RegulatorCatalytic DomainHumansIon Channel GatingMutationAdenosine TriphosphateCystic Fibrosis Transmembrane Conductance Regulatorcomposite ATP-binding siteD-loopflickery closuremolecular biophysicsmutant cyclestructural biologyxenopuszebrafish

Identifiers

PMID37782012
PMCPMC10569789
OpenAlexW4387241362

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.