Evidence map›Paper›PMID 37780908›Full record

ArticleVirusdisease2023

Utility of CDC DENV1-4 real time PCR assay and trioplex assay for the diagnosis of dengue in patients with acute febrile illness.

Subhabrata Sarkar, Ishani Bora, Parakriti Gupta, Gajanan Sapkal, Shveta Shethi, Kanwalpreet Kaur, Radha Kanta Ratho

Open access · greenAbstract read
In one paragraph

Article in Virusdisease, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Subhabrata Sarkar *Department of Virology, Post Graduate Institute of Medical Education and Research, Chandigarh, National Institute of Virology, Pune, India.
Ishani Bora *Department of Virology, Post Graduate Institute of Medical Education and Research, Chandigarh, National Institute of Virology, Pune, India.
Parakriti GuptaDepartment of Medical Microbiology, Post Graduate Institute of Medical Education and Research, Chandigarh, National Institute of Virology, Pune, India.
Gajanan SapkalVirus Research and Diagnostic Laboratory, Diagnostic Virology Group, ICMR-NIV, Resource Centre, National Institute of Virology, Pune, Maharashtra India.
Shveta ShethiDepartment of Medical Microbiology, Post Graduate Institute of Medical Education and Research, Chandigarh, National Institute of Virology, Pune, India.
Kanwalpreet KaurDepartment of Virology, Post Graduate Institute of Medical Education and Research, Chandigarh, National Institute of Virology, Pune, India.
Radha Kanta RathoDepartment of Virology, Post Graduate Institute of Medical Education and Research, Chandigarh, National Institute of Virology, Pune, India.ORCID 0000-0001-8880-8458
Post Graduate Institute of Medical Education and Research · INICMR-National Institute of Virology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleic acid amplification tests (NAATs) have revolutionized reliable detection of dengue virus (DENV) during acute phase of infection. The study evaluated performance of CDC DENV-1-4 real-time assay, trioplex RT-PCR and heminested conventional RT-PCR assay in the diagnosis of DENV. The three NAATs were performed on 107 consecutive samples collected from patients suspected of DENV infection during acute phase of illness. Their performance was compared against composite reference standard, consisting of DENV NS1 antigen ELISA and DENV IgM ELISA. 88/107 study samples were positive by DENV ELISA, either NS1Ag (80), IgM (3) or both (5). The overall sensitivity of CDC DENV-1-4 RT-PCR assay, trioplex RT-PCR assay and conventional multiplex RT-PCR was 68.18%, 54.55% and 38.64%, respectively in diagnosing dengue during acute phase, with an area under the curve of 0.841, 0.773 and 0.693 respectively when compared against composite reference standard. The sensitivity was 82.93%, 73.17% and 51.22%, respectively within three days of illness and 60%, 42.86% and 28.57%, respectively between 4 and 5th day of illness. All the three molecular assays had 100% specificity. Maximum concordance values of 86.9% were recorded among CDC DENV-1-4 rRT-PCR assay and trioplex assay with kappa value of 0.74, suggestive of substantial agreement. CDC DENV-1-4 rRT-PCR assay can be used as a reliable and accurate test for diagnosis of DENV during acute phase of illness.

Indexed as

Acute phaseCDC DENV-1–4 real-time PCR assayDengueTrioplex assay

Identifiers

PMID37780908
PMCPMC10533452
OpenAlexW4385288274

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.